Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02357 ATGAACATGCCGCCGAAGCCAAACCAGGTGGTAGTGAGAGACCTCGTCGAGGAAGCCAAGAAACGGATCGTCATCCTCGTCGTATGCGTTGTCGGACTCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTGATTATTATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCCACCAATGTTCAGTCTACAAAGAAGCCTATGGAAAATCCTAAAGTTATTGCAAGGTTTGAGTGGAGAACAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGCTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGAAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGGATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTATTAATCTCATTTGCACACACTTGGAGCTGTTTCGTGCTGCCCATTCAAAGATTGTAAAAAACCACACTGGTTTGTTAACAATTGAAAGTCGAGACATGGAGCTAAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCTTTATTTTCTGCAGAAGCTGAACATAAGGTTTTGCAGCATCTGATGACTGGTCTTATGCGTGTTACTTTCAAGTCTGAGGATTTGCAGTGTTCGTTCTTTCGATGTACTGTCAGAGAGCTTCTTGCATGTGCTGTAATACGACCTGTCCTAAACTTAGCAAATCCAAGATTTATTAACGAAAGAATTGAATCTGTGGTAGTTAACAAGACCAAGGTTAACAAGGGGGTTGCTGCAGCTCAAGAGGCATCTCACACTAAAGTAGATGAGTTACAGGTTTCATCCGATGATTTCTCCAAGACTTCAGATCCTTCAGTTACTGGCGTTGAGCTTGTGCAGCTAAAAAATGGTCAATCCAAAAATGCAGACACTTCTAAAGAAAATAATGCCCGAGATAATATTATTAAAGATCCATTGCTTTCAGTTTCAGTTGATACTCGATTTTCCCGTACATGGAACTCAATGCCTGCAAACACTCTAATTAATGATGACCAAAGTATTCACCGACATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATGTCTCGCAGGAAGACCCAAGCTCTTGCTCCAGAACATTTTGAGAATGTGTGGACTAAAGGGAAAAATTACAAGAAAAAGGAAGGTGAAAACCCATCAAATGAGCATGTTTCACAGCATCCTGTGGCAGGGAAATTGCTGAAGGTAGATCATATGAAAGAAATATCTGGACCCAATAAAAAAGATACTAATTCCAAGCTTATTGCCCCCAAGGGACTCCACATTAATTCTGGACACAGTAATCAATTCTCCATTGAAAATAGATCCATTCATGCAGACAAGAATGGATCAAGTTCAGTTACCTCATATAGAGACAATGAATCAGTTCCATCATATAAAGACGATGAGCATAGCCACATTTATGGGCAGATGAGTGATTCAGAGAGCAGTACATCTTATACTTCTCAAGATGACGAAAGTAGTACTGTCACTGGTCTTGATACCCCTGTCACTAAGGTTTGGGATGGAAAAAGTAATAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATTTTGACAATCACAGTGCAAAGAAAAGGAATAAGAGACATTCTCGCTATCCAAGATTATCCAGAGCACAATCTGGCAGTAAAAGGTCTTGGTCAGGTGGTCATAAAATACAAACGTGGCAGGAAGTTGAGAGAACAAGCTTTTTATCTGGTGATGGTCAAGACATACTTAATTCTTCAAAATCACGAATAGATTCTGAGGAGTCCAGTGATGATGCTGTTATGGAAAGTTTAGGCAGACTTTATAGTGGAGCAGCAGCCTCCTCTTCTGCCCACTCTATTTCTAAAACAGAATCTTGTAGTTTGTCTGTTACTCCCTTGAAAAGTTCCTCTGCCGTAGATTCATTTTACAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCAAAAACCTTTGCTGTTTACTCCATATCCGTTACAGATATAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTCCCTCAGTATAATCTTCATTTGCCACCAAAGCATTTTCTGTCAACTGGTTTAGATGTACCGGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTTATGCAACTACCAACAGTTTCAGAATCAATTGAAGTGTGGGACTTTCTCAGTGTCGATTCTCAGACATACATATTCTCAAATTCTTTTTCTATCATGGAAACTTTATCAGTTGGCATGGATGCGAGACCTATTGAGAAGACTAAAAACACTTCTCACTTTTCTGCACCTGCAAGTGATCCTCTGGCCTTTAGGAGAGGAAACTGTAATGCTGAAAGTAAAGAGTCTGTTTTGCGAGCAAAAAATAATGTTGAGACCGATGTATTGAGGTCAAAAGTAAACAGCATGCCTCTTTCTCTACCAAAAAAGAATACACATGAACCTATAGATTCATTCGACAATTCTAGCCGCAATACAGATATTCTAGCGCAGAAGAGTGCACCTTCTCCCAATAACTTGCAGAAGACAGTGAAAGGAAGAGATAATTCAGATGAGGCTTCTGAAGTGCACCGTGATACTTCTGATGCTTTTCCAACAGAGTGGGTGCCGCCAAATTTGAGTGTACCTATATTGGATTTGGTTGACGTTATCTTCCAGGTTCAAGATGGTGGATGGATCAGGCGGAAAGCTTTTTGGGTTGCTAAACAAGTTTTACAACTTGGAATGGGTGATGCATTTGATGACTGGTTGATAGAGAAAATCCAGCTTCTTCGTAAGGGATCAGTGATTGCTTCAGGGGTCAAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAATCGCCGACAACCACCACCACCTACAAGTCCATCTCAAAATTCTCCTCGTGGAAATCAAACTGCACAAGTAACTTCTCCAAGATTGGAAGATGAGCAGCAACGAGAGGCAGATCGGCGAGCAAAATTTGTTTATGAGCTAATGATTGATCATGCACCGCCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAGCAATGTGCAAGGGATCTATATTTTTTCCTTCAGTCATCCGTTTGCTTGAAGCAGCTGGCATTTGACATCCTGGAGCTGCTTTTGACGTCGGCATTTCCCGAGCTTGATAATATCTTTAAGCAGCTGCAAGACGAAAAACATATATTTGGTGAGTTCAGAACTCAGTAA 3435 0.4058 MNMPPKPNQVVVRDLVEEAKKRIVILVVCVVGLSYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSTNVQSTKKPMENPKVIARFEWRTKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVKIINGVLGEISGRMRNINLIDFLIRDLINLICTHLELFRAAHSKIVKNHTGLLTIESRDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMRVTFKSEDLQCSFFRCTVRELLACAVIRPVLNLANPRFINERIESVVVNKTKVNKGVAAAQEASHTKVDELQVSSDDFSKTSDPSVTGVELVQLKNGQSKNADTSKENNARDNIIKDPLLSVSVDTRFSRTWNSMPANTLINDDQSIHRHRSGGEWGDILDVMSRRKTQALAPEHFENVWTKGKNYKKKEGENPSNEHVSQHPVAGKLLKVDHMKEISGPNKKDTNSKLIAPKGLHINSGHSNQFSIENRSIHADKNGSSSVTSYRDNESVPSYKDDEHSHIYGQMSDSESSTSYTSQDDESSTVTGLDTPVTKVWDGKSNRNQAVSYVHHPLENFDNHSAKKRNKRHSRYPRLSRAQSGSKRSWSGGHKIQTWQEVERTSFLSGDGQDILNSSKSRIDSEESSDDAVMESLGRLYSGAAASSSAHSISKTESCSLSVTPLKSSSAVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFPQYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSVGMDARPIEKTKNTSHFSAPASDPLAFRRGNCNAESKESVLRAKNNVETDVLRSKVNSMPLSLPKKNTHEPIDSFDNSSRNTDILAQKSAPSPNNLQKTVKGRDNSDEASEVHRDTSDAFPTEWVPPNLSVPILDLVDVIFQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPNRRQPPPPTSPSQNSPRGNQTAQVTSPRLEDEQQREADRRAKFVYELMIDHAPPAIVGLVGRKEYEQCARDLYFFLQSSVCLKQLAFDILELLLTSAFPELDNIFKQLQDEKHIFGEFRTQ 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02357 1144 SMART PXA_3 111 290 IPR003114 -
Spst4g02357 1144 SMART PX_2 694 798 IPR001683 GO:0035091
Spst4g02357 1144 MobiDBLite consensus disorder prediction 624 643 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 593 608 - -
Spst4g02357 1144 PANTHER PX SERINE/THREONINE KINASE PXK 103 1139 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 493 508 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 889 915 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 873 936 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 1020 1058 - -
Spst4g02357 1144 SUPERFAMILY PX domain 691 799 IPR036871 GO:0035091
Spst4g02357 1144 ProSiteProfiles PX domain profile. 690 802 IPR001683 GO:0035091
Spst4g02357 1144 MobiDBLite consensus disorder prediction 1037 1051 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 509 523 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 493 608 - -
Spst4g02357 1144 Pfam PX domain 720 798 IPR001683 GO:0035091
Spst4g02357 1144 Gene3D - 690 806 IPR036871 GO:0035091
Spst4g02357 1144 MobiDBLite consensus disorder prediction 916 933 - -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 524 567 - -
Spst4g02357 1144 CDD PX_SNX19_like_plant 692 796 - -
Spst4g02357 1144 Pfam Sorting nexin C terminal 963 1102 IPR013937 -
Spst4g02357 1144 Pfam PXA domain 107 284 IPR003114 -
Spst4g02357 1144 MobiDBLite consensus disorder prediction 456 481 - -
Spst4g02357 1144 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02357 Spst-Chr4 64195241 64202631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02357 K17925 - gmx:100778731 1957.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02357 4 64195241 64202631 Spst4g02357 4 64195241 64202631 ECH