Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02351 ATGGAACAAGAACAGGAAAGTTGCAGGTCCAAACTATTCAATTTCAAAGGAGTGCTTGAGAATGCAGGGAGGCATACAAAGAGTTTGAGCATTGAGAGTGCGGGCATATTAGATCCTGCTTCTTCAGAGGACGATCCAGCATCGTCAAAAAGTCAAGGATCAAGATCTCTGAATGATCCAGATAGGGCTCCTAAGCCAAGGGTAAACAAGGAGGAAATGTTAGCCAAAGAAGCCAGAGACAAACTAGCGCTAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTACTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAACAAAAGCGCCTAGAGCCAATGCCACCAGAAAGGAAGGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCAGTGCAACAAAAAAACAAGGATGGCTCAACCATGGAGGTTATGACAACACGACAAAGAACTGATCTCCACATGAATATCCCTGCCTTACGAAAGCTTGATACAATGCTTATTGACTGTCTAGATAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAGAGATGCAGATGATCCTGATAATAGAAAAGGTGATAACAAGTGGTGGTTGCCTACACCTAAGGTACCTCCAGAGGGTCTATCTGATGCAGCAAGAAGGTTTGTTCAATATCAGAAAGATTGCGTGAACCAAGTACTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGCTATATTGAATCCCTGCCCAAGGCAAGTCAAAAGGAACTAAATGGAAGATCAAGTCTAGGGGACATGATATACAGGAGCATTACAGAAGAATTTTTCGATCCTGATCAGCTGCTAGCTTCCATGGACATGTCGTCAGAACATAAAATCCTAGATCTCAAGGACAGAATTGAGGCATCCATTGTGATTTGGAGGCGGAAGATGAACCAAAAAGATTGTAAATCATCTTGGGGTTCTGCTGTGAGTATGGAGAAGAGAGAACTCTTTGAAGAGAGGGCAGAAACCATCTTACTTCTCCTAAAACATCGTTTTCCAGGGATTCCCCAATCTGCATTGGATATAAGCAAAATCCAATACAACGGGGACGTGGGGCAAGCTGTTCTTGAAAGTTATTCAAGGATATTGGAGAGTTTGGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCATGCAGATTACCTCACTCAAAATCCATCGAGTAGAAAGAGTGTTTCGAGAAACTCAAATTCCAAGCCAGATAAGTCTCCAACTCCAAAAGAAGAGGTGGAAAAGACTGGCTCAGAAACAATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGAGTCAGACAATAAGAAAGACTCATCAGATGACTTCTACAGTGACATGGATAGTGGAAAGCCCCCAAAACTTCCAGACGTAGTGACCGACAAGAAGGTGTCCTATCTTGAGACATTGGGGGGTATGAGAAGTCCAACAGCACGCCATTAA 1602 0.4251 MEQEQESCRSKLFNFKGVLENAGRHTKSLSIESAGILDPASSEDDPASSKSQGSRSLNDPDRAPKPRVNKEEMLAKEARDKLALEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGSTMEVMTTRQRTDLHMNIPALRKLDTMLIDCLDNFKDQNEFYYVSRDADDPDNRKGDNKWWLPTPKVPPEGLSDAARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKASQKELNGRSSLGDMIYRSITEEFFDPDQLLASMDMSSEHKILDLKDRIEASIVIWRRKMNQKDCKSSWGSAVSMEKRELFEERAETILLLLKHRFPGIPQSALDISKIQYNGDVGQAVLESYSRILESLAFTVLSRIEDVLHADYLTQNPSSRKSVSRNSNSKPDKSPTPKEEVEKTGSETMTLSDFMGWSSDQGESDNKKDSSDDFYSDMDSGKPPKLPDVVTDKKVSYLETLGGMRSPTARH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02351 533 Gene3D PRONE domain, subdomain 1 90 434 - -
Spst4g02351 533 MobiDBLite consensus disorder prediction 28 73 - -
Spst4g02351 533 FunFam Rop guanine nucleotide exchange factor 14 315 442 - -
Spst4g02351 533 Gene3D PRONE domain, subdomain 2 277 399 - -
Spst4g02351 533 MobiDBLite consensus disorder prediction 439 453 - -
Spst4g02351 533 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 42 483 IPR038937 GO:0005085
Spst4g02351 533 MobiDBLite consensus disorder prediction 484 501 - -
Spst4g02351 533 FunFam Rop guanine nucleotide exchange factor 9 277 399 - -
Spst4g02351 533 MobiDBLite consensus disorder prediction 439 513 - -
Spst4g02351 533 MobiDBLite consensus disorder prediction 469 483 - -
Spst4g02351 533 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 85 437 IPR005512 GO:0005085
Spst4g02351 533 ProSiteProfiles PRONE domain profile. 76 443 IPR005512 GO:0005085
Spst4g02351 533 MobiDBLite consensus disorder prediction 44 58 - -
Spst4g02351 533 FunFam Rop guanine nucleotide exchange factor 14 78 313 - -
Spst4g02351 533 MobiDBLite consensus disorder prediction 454 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02351 Spst-Chr4 64167586 64170139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02351 - - gmx:100812078 850.506