Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02347 ATGCATCATTGTGCATGTGCGGATGCGTATGTATATACATGTGTATGCGAAATCAATGGTGGGTTTATTCTAGGACCAAGACTGTGTCAGCTACTGACACGTGTAATCGTCCTCAACTGCCATCACCACACTTCACTCTTCTTTTCTCGTTCATTTGGATCGCTCTCTGTCAACCTCTGCATTTCTAACCCCATTCCAACCTTTTCATCTCGCATCAACGAGTGTATCAAAAAGAACTCGCTGGCGAATTTTGGAGAAGTTTTCTATCGTTTTGCCATGAGAGGAAGACAGCGGGTAGCATCCAAGGATCACATATTTGGCCAAGATAAAGATGAAACTTTAGCTTCAGTGCGTGTATCGAATGCCAAACCATGTTGGCGGCATTCTTTTCGGCATGTACTAGCGGCGTCTATTTCTTCATTCTTGTATGGATACCATATTGGAGTAGTCAATGAAACATTAGAAAGCATTTCTATAGATCTTGGATTTACTGGGAATACAATGGCAGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTCTGTTCAGCGGATGGATTGCAGATGGTGTTGGGCGTAGAAGAAGTTTCCAGTTGTGTGCTTTACCAATGATAATTGGGGCTGGAATGAGTGCAACAGCAAAAACTCTGTGGGGCATGCTTCTGGGAAGGTTATTTGTTGGTACTGGAATTGGACTTGGTCCACCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTTCGAGGTGCTTTTGGAGCCTTAACCCAAATTGCGACATGTCTTGGACTCATGGGTTCTTTCTTTATTGGAATCCCGGCAAAGGAAATAGTTGGTTGGTGGCGAATTTGTTTCTGGGTATCTGTCATTCCTGCTACAATACTTGCCCTTTTTATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGATAGGAAGAACCACTGAAGCTGAATCTGAATTTGAGAAGCTCTTGGGAGGAGTACATGTGAAAGCTGCAATGACTGAACTGTCAAAGTCTGACAGAGGAGATGGATCTGATACAGTATCAGTATCAGATTTAATCTGTGGCCGCTACTCCAGAGTGATGTTCATTGGATCTACGCTTTTTGCGTTGCAGCAGCTATCTGGCATAAATGCCGTTTTTTATTTCTCTTCAACTGTCTTTGAAAGTTTTGGTGTACCATCTGATATTGCAAACACATGTGTAGGAGTCTGCAATTTATTGGGGTCTGTTATTGCAATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTGGGTAGCTTTCTGGGCATGGCATTAACGATGGGTCTTCAAGTCATGGCTGCTAGTTCTTTTGCGTCCGGATCTGGCGCAATGTATCTATCTGTTGGTGGCATGTTACTGTTTGTGCTGTCATTTGCTTTTGGTGCTGGTCCAGTTCCTTGTCTTGTCATGTCTGAAATACTACCTGGCAATATCAGAGCAAAGGCAATGGCAATTTGCCTGGCTGTGCATTGGGTGATAAACTTCTTCGTGGGTCTATTTTTTTTGCGCTTGCTGGAGCAAATTGGGGCGCAACTCCTGTACTCTATTTTTGGTTCATTTTGTTTGATAGCGGTGGTTTTTGTGAAGAAATATATTCTGGAAACAAAGGGGAAGTCACTTCAGGAAATTGAAATTGCACTTCTTGCTCAAGAAGTGAACTTAACAAGCTAA 1725 0.4296 MHHCACADAYVYTCVCEINGGFILGPRLCQLLTRVIVLNCHHHTSLFFSRSFGSLSVNLCISNPIPTFSSRINECIKKNSLANFGEVFYRFAMRGRQRVASKDHIFGQDKDETLASVRVSNAKPCWRHSFRHVLAASISSFLYGYHIGVVNETLESISIDLGFTGNTMAEGLVVSICLGGAFIGSLFSGWIADGVGRRRSFQLCALPMIIGAGMSATAKTLWGMLLGRLFVGTGIGLGPPVAALYVAEVSPPAVRGAFGALTQIATCLGLMGSFFIGIPAKEIVGWWRICFWVSVIPATILALFMEICAESPHWLFKIGRTTEAESEFEKLLGGVHVKAAMTELSKSDRGDGSDTVSVSDLICGRYSRVMFIGSTLFALQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLLGSVIAMILMDKLGRKVLLLGSFLGMALTMGLQVMAASSFASGSGAMYLSVGGMLLFVLSFAFGAGPVPCLVMSEILPGNIRAKAMAICLAVHWVINFFVGLFFLRLLEQIGAQLLYSIFGSFCLIAVVFVKKYILETKGKSLQEIEIALLAQEVNLTS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02347 574 CDD MFS_GLUT_like 135 552 - -
Spst4g02347 574 ProSitePatterns Sugar transport proteins signature 1. 188 205 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 NCBIfam sugar porter family MFS transporter 130 561 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PRINTS Sugar transporter signature 225 244 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PRINTS Sugar transporter signature 140 150 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PRINTS Sugar transporter signature 380 390 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PRINTS Sugar transporter signature 489 501 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PRINTS Sugar transporter signature 466 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 PANTHER SOLUTE CARRIER FAMILY 2 125 566 IPR045263 -
Spst4g02347 574 ProSiteProfiles Major facilitator superfamily (MFS) profile. 132 554 IPR020846 GO:0022857
Spst4g02347 574 SUPERFAMILY MFS general substrate transporter 119 562 IPR036259 -
Spst4g02347 574 FunFam facilitated trehalose transporter Tret1 126 567 - -
Spst4g02347 574 ProSitePatterns Sugar transport proteins signature 1. 421 437 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 Pfam Sugar (and other) transporter 134 563 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst4g02347 574 Gene3D MFS general substrate transporter like domains 127 566 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02347 Spst-Chr4 64136063 64143600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02347 97 510 Organic Solute Cotransporters AT1G67300 65.166 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02347 - - gmx:100811182 863.988