Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02345 ATGAGTCGCTCATTGAAAGCTTTCAACAAACACCTCACTCTCCTCCCTCTCCCTCTCCACATGCGCTATGCTTCTTCCCATGCCTTCATAACATCCTCTTCTTTCCCTCTTTTCCCACATCTTGTTTCCTACCCCAGGTTCTCTTTCTCTCAGCGTCGTCCGCTCTCTTCATCTGCACCTGCTACATTAATGGAGGTGGTCAAAGCAATTGCAAAGCAAGAACCTACAGCTCATGAAAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTCATCTCATCAGCACAGAGAATATCTAGTCTCTTGTGTGCCAGTGATGCACAAACAGGAAATCTTGGTGGTGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATGCTTGGGATTTGGCTCAGTGGAGGTGTTGCTGTTCCCCTTGCAATCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGGATATATCTGCTATACTGAGTACTGAAGAGCATAGTGAATTAATGCAAAGGGTAGCCGCTAAAAGCTCTTCTCAATTTTTTCATCTTCCACCTGTTGTCAATAAGTCTTCAGAGAAAAGCAGAGATGAACATCTTCAGAATGGGGAAAGTCATACAGACAGAATTTTGTGGGATGATATTGGAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACCGAAGCATCTTTTCCCAGGTCCAAACCTTGACAAAAGCATGGGAGTACACATCTACTGACAAGTTTCTGCATTGTCTTCCACTACATCATATCCTTGAAAGTTTGTGTGTATACATCTTTCAATATTTTTCTAATTATTTAAAACATACACATCTCTAG 912 0.4178 MSRSLKAFNKHLTLLPLPLHMRYASSHAFITSSSFPLFPHLVSYPRFSFSQRRPLSSSAPATLMEVVKAIAKQEPTAHENVAIRADQKSYSYKQLISSAQRISSLLCASDAQTGNLGGARIGIVAKPSAEFVAGMLGIWLSGGVAVPLAISYPEVELLYVINNSDISAILSTEEHSELMQRVAAKSSSQFFHLPPVVNKSSEKSRDEHLQNGESHTDRILWDDIGRSSEDPALILYTSGTTGKPKGVVHTHRSIFSQVQTLTKAWEYTSTDKFLHCLPLHHILESLCVYIFQYFSNYLKHTHL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02345 303 PANTHER ACYL-COA SYNTHETASE 61 288 - -
Spst4g02345 303 SUPERFAMILY Acetyl-CoA synthetase-like 58 290 - -
Spst4g02345 303 Gene3D - 48 296 IPR042099 -
Spst4g02345 303 PRINTS AMP-binding signature 241 249 IPR020459 -
Spst4g02345 303 PRINTS AMP-binding signature 229 240 IPR020459 -
Spst4g02345 303 Pfam AMP-binding enzyme 77 291 IPR000873 -
Spst4g02345 303 ProSitePatterns Putative AMP-binding domain signature. 234 245 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02345 Spst-Chr4 64120103 64122905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02345 120 289 Acyl Lipid Metabolism Gene Families AT4G14070 29.381 1.85e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02345 K18660 - gmx:100813324 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02345 4 64120103 64122905 Spst4g02345 4 64120103 64122905 ECH