Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02332 ATGGAATCGAGTCGAAGAGCGGTGGAGTCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACATCCGATGAAGATAAAGTGACTCCCGTTTACAAATTGGAAGAAATCAGCGAACTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGATTTCAGAGTTTGTCTTAAAACGTTTAGACCATAAAAGCCCAATTGTGAAGCAGAAGGCTTTAAGATTGATCAAGTATGTGGTTGGGAAGTCTGGTGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCAGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGTGATGCACTAAATAAGGCTGTGAGAGACACTGCTCATGAGGCTATCGCTGCCATCTTTTCAGAAGACAATAGCAAGCCGGCACCTGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTACGAACCGCCGCAGGAAGACAAGAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCATCAATTAAGCAAGGGCTTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCTGGCAGCTATAAGAGTCCAAATCTTCGAAGATCATTGACCGATGAAACAGACCATGGTGACCGATATGAACCAGTTGCATATCATAATGAAGCTCAGAGTAGTTTTGGAGTTTCAAAGAATCAATCCACTGGTCCTTGGAATCAGGATTCAAGAGTAACTAAGACAGACACGTTAAATGGGGAATCTGGTGCAAGTTATGCAGAGAGGAAGACAAGAGAAGATAAGTTGCTGGAGACAATTGTAACATCAGGTGGTGTTCGTCTGCAACCCACTCGAGATGCAATTCAAGCTTTCCTAGCAGAGGCTGCAAAGTTGGATGCACTGGCTTTATGTCATGCCCTTGAACTGAAGCTCCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAGTCCATTCTTAGAAAGAAGGATGATGATCATTTTTCACTGGTGGAATCTTACTTCACCGAAAATAAAGAAGTGGTGCTGAGATGTTCTGAATCTCCCCAAGTCTCTTTAAGGGAAAGGGCTGCGAAGGTTCTTGGTCTTTTAGGTGGAAGCCAGCCAAACAGCTTTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATCCTGCTGTTGAAGAGCTGCCTAACTTGATAGACACGGGTGATTCAAATGACTATCATGGAACTGAGGACATTCTAAAGAGTACAACAGATCAAAACATATCAATTTTGACATCCACTCCTCTGGTTGATGATTTATTTGGAGATTTTAGCGGCTCTGTTGGAGCTAGTCAAGAACTAAAAAATGATGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAATAAAGAACATGCTGATGATCTCTTTTCTGGGATGACTGTTGGTAGTGAGAAACAGAGCGATCATAAGATTCACAGGCAGGGTAATACAAGTGATCCTCAACTTTTTGACATTTTTGCTTCCAATTCTGAACAAGGAAACAATAAGGAGCTTGTCAGTGATTTAATGGCTGGTCTATCAATGGATGAAAATACCTCAAGTACAAAGCAGAAGGGAACATCTCCTTCCATGCAACCTGAGTCTTTATTTGCAGGCTTAACTGACCATATCCCTGGCAATACTTCAGATGGCATGTTGAGCTCTCAGCCAATGGGGTTGAACGTAAATCCCATGTTTCCTACTGGTGCTCTGCCTTTTAATATACCGCCTGGTTTCATGTTGAACCAACCTTATCCGTCCCAGCCTCTTAATTACGGTGCCATTAATTACGGTGCCATGGGAACTCTTTTTGCTCAGCAGCAATTCTTAGCAACAATGGCTAATTTCCAGCACCTTAATAATGCCAATGATGGTGTTGCTCAAATGGCTGGACCCAATGGAAGATCACCTTTTCCAGACATATTTCAACCAAATTTTCAAACGCAAACTCCTAGCTCAATGATCAACACTACAAGGAAAGAAGAAACTAAAGCGTTTGACTTTATCTCTGACCATATGACCTCTGCTCGTGATTCAAGGAGAATGATTTGA 2103 0.4232 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEISEFVLKRLDHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAIAAIFSEDNSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNDPGSYKSPNLRRSLTDETDHGDRYEPVAYHNEAQSSFGVSKNQSTGPWNQDSRVTKTDTLNGESGASYAERKTREDKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALALCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSLVESYFTENKEVVLRCSESPQVSLRERAAKVLGLLGGSQPNSFAINSENAVKTENPAVEELPNLIDTGDSNDYHGTEDILKSTTDQNISILTSTPLVDDLFGDFSGSVGASQELKNDDDPFADVSFHTSENKEHADDLFSGMTVGSEKQSDHKIHRQGNTSDPQLFDIFASNSEQGNNKELVSDLMAGLSMDENTSSTKQKGTSPSMQPESLFAGLTDHIPGNTSDGMLSSQPMGLNVNPMFPTGALPFNIPPGFMLNQPYPSQPLNYGAINYGAMGTLFAQQQFLATMANFQHLNNANDGVAQMAGPNGRSPFPDIFQPNFQTQTPSSMINTTRKEETKAFDFISDHMTSARDSRRMI 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02332 700 PANTHER UNCHARACTERIZED 5 690 IPR039273 -
Spst4g02332 700 Pfam ENTH domain 16 128 IPR013809 -
Spst4g02332 700 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Spst4g02332 700 Gene3D - 2 139 IPR008942 -
Spst4g02332 700 MobiDBLite consensus disorder prediction 227 265 - -
Spst4g02332 700 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Spst4g02332 700 SMART VHS_2 13 147 IPR002014 GO:0035091|GO:0043130
Spst4g02332 700 MobiDBLite consensus disorder prediction 227 259 - -
Spst4g02332 700 MobiDBLite consensus disorder prediction 186 215 - -
Spst4g02332 700 SUPERFAMILY ARM repeat 35 409 IPR016024 -
Spst4g02332 700 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02332 Spst-Chr4 64031547 64035421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02332 - - gmx:100790466 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02332 4 64031547 64035421 Spst4g02332 4 64031547 64035421 ECH