Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02293 ATGGCCAGTATTCTGGGTCCTTCTTTAAGCATAGTCACGTCCTACGCATCCAGAAATGAGCCACAATTTGTCTCTAAACTCACTGCAGTGAGAGGGAACTCTCATTCTCCACTATGGTTTTCTTACACTCGTCCTGGAAATCCCGCTAGAAACCATTTTCAGCTCAAATCCTCAAATGGGGTTTTGCTAAATGCTGTTTCTTCTAAGGATGGTTTAGCTGGAACTTCATCGACTAAAGAAGATAGCAAGTCCCAACCACTTCAGGGACTATTTCCCTTGTCAAACTCAGAATGCACAGGATCAAACCTTAGTATAACGGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTTTTTTATGAAGATTGGCTACCTGAGAATTTTATTGTTTTTGGATTTGCTCGGACTAAAATGACCAACGAAGAATTAAGGAACATGATTAGCAAAACTTTAACATGCAGAATTGACAAGAGAGAAAATTGCGAAGATAAAATGGATCAGTTCTTAAAAAGATGCTTTTACCATTCTGGTCAATACAATTCTGAGGAGCACTTTTCAGAATTGGATATCAAGCTGAAAGAGAAAGAGGGTGGAAAATTATCAAACAGATTATTTTATTTATCAATACCTCCAAACATATTTGTCGATGTGGTGAGATGCGCTAGCCAAAAGGCTTCTTCAAAAGATGGGTGGACTAGGGTTATTGTTGAAAAGCCGTTTGGTCGTGACTCAGAATCATCTAGTGAGCTAACAAAATGTTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGATCATTACTTGGGTAAAGAGCTTGTGGAGAATCTATCAGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGGAATGTGCAGATAATATTTTCTGAAGATTTTGGAGCTGAAGGAAGAGGGGGTTATTTTGATCACTATGGAATCATTCGTGATATAATGCAAAATCATCTTGTGCAAATACTAGCTTTGTTTGCAATGGAAACACCTGTCAGCTTGGCTGCTGAGGACATAAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTGTTGGTCAATATAAGGGCCACAGCAAGGGTGGTAAATCATATCCTGCCTATACAGATGATCCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCAGCAGCAGCTCTTTTTATAGACAATGCCAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACATGTCCCAGGTAACTTGTACAAGCGGAATTTTGGAACTGATCTAGACAAGGCTACAAATGAGCTTGTGCTTCGAGTACAACCTGATGAAGCTATATATTTGAAAATCAACAATAAAGTTCCTGGTCTGGGAATGAGATTAGATAGAAGTGACCTGAATTTGCTTTTCCGAGCAAGGTATCCAAGCGAAATACCAGATGCTTATGAGAGGCTACTCTTAGATGCCATTGAAGGGGAGCGAAGGCTGTTCATTAGAAGCGATGAGCTTGATGCAGCTTGGGCACTATTCACTCCTCTGCTAAAAGAAATTGAAAACAAGAAGATTGCTCCGGAGCTCTACCCCTATGGTAGCAGAGGACCGGTTGGAGCGCATTACCTTGCTGCAAGGCACAATGTAAGATGGGGAGATCTTGGTAGTGAAGACTCATAA 1773 0.4083 MASILGPSLSIVTSYASRNEPQFVSKLTAVRGNSHSPLWFSYTRPGNPARNHFQLKSSNGVLLNAVSSKDGLAGTSSTKEDSKSQPLQGLFPLSNSECTGSNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFIVFGFARTKMTNEELRNMISKTLTCRIDKRENCEDKMDQFLKRCFYHSGQYNSEEHFSELDIKLKEKEGGKLSNRLFYLSIPPNIFVDVVRCASQKASSKDGWTRVIVEKPFGRDSESSSELTKCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQIIFSEDFGAEGRGGYFDHYGIIRDIMQNHLVQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLQLENVVVGQYKGHSKGGKSYPAYTDDPTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPSEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGSEDS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02293 590 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 275 582 - -
Spst4g02293 590 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 288 IPR036291 -
Spst4g02293 590 Gene3D Dihydrodipicolinate Reductase; domain 2 274 583 - -
Spst4g02293 590 FunFam Glucose-6-phosphate 1-dehydrogenase 274 583 - -
Spst4g02293 590 FunFam Glucose-6-phosphate 1-dehydrogenase 99 273 - -
Spst4g02293 590 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 102 584 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 85 582 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 Gene3D - 99 273 - -
Spst4g02293 590 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 288 582 IPR022675 GO:0004345|GO:0006006|GO:0050661
Spst4g02293 590 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 107 285 IPR022674 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 NCBIfam glucose-6-phosphate dehydrogenase 103 583 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PRINTS Glucose-6-phosphate dehydrogenase signature 422 448 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PRINTS Glucose-6-phosphate dehydrogenase signature 241 254 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PRINTS Glucose-6-phosphate dehydrogenase signature 265 293 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PRINTS Glucose-6-phosphate dehydrogenase signature 317 334 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 PRINTS Glucose-6-phosphate dehydrogenase signature 335 351 IPR001282 GO:0006006|GO:0016614|GO:0050661
Spst4g02293 590 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 275 281 IPR019796 GO:0004345|GO:0006006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02293 Spst-Chr4 63688494 63692201 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02293 K00036 - gmx:100780018 1100.89