Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02277 ATGGGGCACCAGGCGGGGCTGCAGTCACTGAAGAGAATGGTGAGGCTCTGCGGCAGTTGGGGGATTAAGGTTCTATCATCATCAGGCATCTGGAGGCGAAAACAACGCAACCGCAATCCCGACATGTACGGCGGCGCCTCCACCAAGCTTGGCCGCGGCGCCCCTCACCGCCGCTCCTTCCCTCCTCCGGCGCCTCAACGTTCCTCTGCCCCCGGCGGCCGCCTCTCCCTCGGGGCTTCCGCCCGCAACGCCGGAAAGGAGGAGGCGGCGGCGGCGGCTCCAGCGGTGGAGGAGACCTTTAGCCTGGTCTCCGGAAGCAACTCTCTTGCTTTCTCGATGATCATACGGCTCGCCCCCGACCTCGTGGAGGAGATCAGGCGTGTGGAGTCACAGGGCGGCACCGCGCGTATGAAGTTCGGCCCCAATCCTCACAATCCAATAGGAAACATTATAGATGTTGGTGGGAAGGAGTTCAGGTTTACATGGTCAAGGGAATTGGGTGACCTCTGTGATATTTATGAAGAGCGCCGGAGTGGCGAAGATGGGAATGGTTTGCTTGTTGAATCTGGGTGTGCTTGGCGCAAGCTGAATGTGCAGCGTATCTTGGACGAGTCCACTAAGAATCATGTCAAAAGGCGGTCAGAGGAAGCTGACCGCAAAATGAAGTCTCGCAAAGCCATTGTGTTAGAGCCTGGGAACCCGCCTATGAAAAGTCAGATAAAGGCACTAGCAGCTGTTGAGGCTACAACGTGGAAGAATTACAGTAAGAAGAAAGAGGCTGCACTCAAGAAAAGAAAAGTGGAAACCCTTCAAGTTGGTGGGCCCCCAAAATCTTCCCATAGACCTGGATTGACTTCAGCAAATACTAGTACCAAGGGTAGACATTCCTCTCCTCTTCCATCTCCGCCAGACCCTTTTGCTGCTGCTTCCTCTCCAGTGGGAGTAGTAAATATGTCTAAGAGCTTCGAGGAGGCTGTGCCAGCACAAATGACAGCTAAACAAGATAATAATGCTGGATCTGAGAAAGAAATCTCTACCAGAACAAACAATGCTGTGAGGAACACACCAGGACGCAAGGGAAATAATGGGTCTAAACCAGCAGAGTTGCAGGGCATGTTAATTTCTCTTCTAAAGGATAAACCTAATGGAATGACTTTGAAGGCCTTGGAGAAAGCTGTTGGAGACACACATCCAAATTCCATAAAGATAATTGAGCCAATTATAAAAAAAATTGCAAAATATCAGGCTCCAGGAAGGTATATATTGAAACCGGAAGTGGATTTGGAAAACTTAAATAAGCCTCAAACTGAAAGCGGAAGTTCTCGTGATGACAATCACAACCAGATACCTACTCGTGAAGAGTTTCATGATCAAACAACAGCTCCACAGGGAGGATTTGAAGAGAAAGTCCCAAATGTTGAATTGGAGGAAATGGTTAAAGTAAAATCTAGCGTAGAAGAAGATACAAACAATCTGGAAATTGATACCCAACATACGTCACCTGATATCCTTGGTGACAAAAAAGGTTCTGATCACAGTGAAGGCCAGGCAGGCAGCTCCAGTGATAGTGGAAGCGACAGTGACAGTGATAGTGACAGCAGTGATAGTGGCAGTGACAGTGGTAGCCACAGTAGGAGCAGAAGCAGAAGTCCTGCCGGATCAGGGAGCGGGAGCAGTAGTGACAGTGAAAGTGATGCATCTTCTAGCAGCAAGGAGGGACTGGAGGGTTCTGATGAGGATGTAGATATTATGACTAGTGATGATGAAAAAGAGTCAAAACAAAAAACGGAAGTCTCTGATCAAAGGATGCCCTTACCCATTCAAGGAAAATCTCCTGATGGAAGATCAATGCAGAATGAGGTTGATGAGAAACAGGATGGTAATGAATCTGATGCAATTGAAATTGAAAAGGACTTACCTGAGGAACCGGAAGCTGAATTGTCTCTACCGCCAGCTACCATTTCAAATAGAGGTGAAAAATATGAAGAAGAGATGAGACCCTTTTCAATTGACTACCAACAGCTCCAAGAACGCCAAAATTATATAGGGAGTTTGTTTGATGAAAGAGAAAATGAAGTTAAAGATAGCTCTAGGCATGAACAGTCTGACAGCTTGGAGAGGTTATCTAAAGGTAAACATAAGAGGGGTTCTGATGTGAAGAATGATGAGAAATCAGAACGTACAAAGAGGTTGAAAGCAGGAAACTTGACCTCTGAACCATTATCTCCCAGTATTGATGCACAGACATTTGATAATTCTCGGAACATGTCTCCTTTTGAATTTACTGAAGACACAGGTAAGGGACCTAATGTACAAGTGTTGAACAGGGCTGATAGACAAGGTAATTCGAGTGTTGTTGGCTTACAAAAGGGACCCAATCGATCATTTGCTGGAAAATGTAGTTCAGATTTTCCACAAACAGGTCAAAAGTCGTCAGCTCAAACCCCTTCAGAAAATCCTTCCTACTCATGGGAAAAATCAGATAAACAAGTTGAAAGTGTAAGTCACATAAAAAAACACTCAGGAAAGGACTTCCCTGCCCGAGAAGCTTCTTCCCTGCAGAAAGATAAATCTCGCAAAGATGCCTCAAATGAAGATATTAATGCCACTGAGAGAAAAGTTCCAAGGAATTTCAGGGATGGTAGTAATGGAAGTAAACAGCCACTATTCATGGATTCTTACTACCAAGAACAAGGCGAAATGGTTGGTAAATCAAAGGAACACCGACACATTACACAGTCACACTTGGGAGCATCACCTCAGGAAAGAGACAGAATTGGTCTTGATCCATCCCCTGTAACTAATGAGCGAGCTATCTCTCTTCAAAGAGAGCTTTCAGACTTGGAGCTGGGTGAACTTCGTGAGTCCACTCCAGATGATACTCATGTTGCAAAGCAATTTGAACGAAAAGGTTCCTTTAAACAGTTGGAAAACAAAGCAAACACTTCAGAGGACAGGAATTCGGATTTCACTAGAGTAAAACCGTCGTTGAAGGCAACTTCAGATTTAGGAAAGTCATCCTCAGCCTTTGTAAATTCTGGTTTTCCCAGTAATTTGGATAGCAATAATAAAAAGAACTCAGATAATCATTTTGAAGATTCATCAAAATCTCGCTCTACGGTTATGCAGACTCATTCACAACATTTGAAAGCAGACCATGCAGAAGTTGGATCTCAAAACAAATTGGCAGAAATGAGCAGTAAATATAGAAATAATGAATCTGGGGTGAGCCAAGATACTGATTTGGAAGGTCGCAGTGAAAGCAATAGAAGAGCACCTGCAAATGCATCTAAACAACAGGATGGTAAAAGGGGAATAGTTTCCTACACTGTGAAAGAAAGTAAAAGGCAAACATCTAATTCGGTGGAAGAGATGACTGACGGAGGAAAGGATTGTGTGTTTGCTGATAGAAATCATAGTGATCAAAAGAAGAGGGAATCATCTTCGGATGAAAATAGTTGCTCTTATTCAAAGTATGAAAAGGATGAACCTGAATTGAAGGGCCCGATAAGGAATTTCTCCCAATATAAAGAATATGTTCAGGAGTATCGTGACAAATATGATAGTTACATCTCCTTGCACAAGATTTTGGAGAGTTACAGGGATGAGTTTCAGAAACTAGGTGATGATTTAGAACATGCTAAAGGCAGGAATATGGGTAGATATTATGATCTTTTGGAACAGATGAAGGAATCCTTTCGACGCTGTGGACAGAGACACAAGAGATTGAAGAAAATATTTGTTGTTCTTCATTTGGAATTGGAGGTTGGGTATGCACTAGGTTTTGATGCTATTTCTAGGTAG 3804 0.4414 MGHQAGLQSLKRMVRLCGSWGIKVLSSSGIWRRKQRNRNPDMYGGASTKLGRGAPHRRSFPPPAPQRSSAPGGRLSLGASARNAGKEEAAAAAPAVEETFSLVSGSNSLAFSMIIRLAPDLVEEIRRVESQGGTARMKFGPNPHNPIGNIIDVGGKEFRFTWSRELGDLCDIYEERRSGEDGNGLLVESGCAWRKLNVQRILDESTKNHVKRRSEEADRKMKSRKAIVLEPGNPPMKSQIKALAAVEATTWKNYSKKKEAALKKRKVETLQVGGPPKSSHRPGLTSANTSTKGRHSSPLPSPPDPFAAASSPVGVVNMSKSFEEAVPAQMTAKQDNNAGSEKEISTRTNNAVRNTPGRKGNNGSKPAELQGMLISLLKDKPNGMTLKALEKAVGDTHPNSIKIIEPIIKKIAKYQAPGRYILKPEVDLENLNKPQTESGSSRDDNHNQIPTREEFHDQTTAPQGGFEEKVPNVELEEMVKVKSSVEEDTNNLEIDTQHTSPDILGDKKGSDHSEGQAGSSSDSGSDSDSDSDSSDSGSDSGSHSRSRSRSPAGSGSGSSSDSESDASSSSKEGLEGSDEDVDIMTSDDEKESKQKTEVSDQRMPLPIQGKSPDGRSMQNEVDEKQDGNESDAIEIEKDLPEEPEAELSLPPATISNRGEKYEEEMRPFSIDYQQLQERQNYIGSLFDERENEVKDSSRHEQSDSLERLSKGKHKRGSDVKNDEKSERTKRLKAGNLTSEPLSPSIDAQTFDNSRNMSPFEFTEDTGKGPNVQVLNRADRQGNSSVVGLQKGPNRSFAGKCSSDFPQTGQKSSAQTPSENPSYSWEKSDKQVESVSHIKKHSGKDFPAREASSLQKDKSRKDASNEDINATERKVPRNFRDGSNGSKQPLFMDSYYQEQGEMVGKSKEHRHITQSHLGASPQERDRIGLDPSPVTNERAISLQRELSDLELGELRESTPDDTHVAKQFERKGSFKQLENKANTSEDRNSDFTRVKPSLKATSDLGKSSSAFVNSGFPSNLDSNNKKNSDNHFEDSSKSRSTVMQTHSQHLKADHAEVGSQNKLAEMSSKYRNNESGVSQDTDLEGRSESNRRAPANASKQQDGKRGIVSYTVKESKRQTSNSVEEMTDGGKDCVFADRNHSDQKKRESSSDENSCSYSKYEKDEPELKGPIRNFSQYKEYVQEYRDKYDSYISLHKILESYRDEFQKLGDDLEHAKGRNMGRYYDLLEQMKESFRRCGQRHKRLKKIFVVLHLELEVGYALGFDAISR 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02277 1267 MobiDBLite consensus disorder prediction 735 760 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 1111 1125 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 534 571 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 331 361 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 331 366 - -
Spst4g02277 1267 Pfam Occludin homology domain 1168 1255 IPR010844 -
Spst4g02277 1267 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 51 1256 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 775 828 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 1090 1104 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 683 733 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 482 933 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 1060 1082 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 258 311 - -
Spst4g02277 1267 Coils Coil 853 873 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 1129 1161 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 950 1161 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 281 297 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 33 83 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 829 879 - -
Spst4g02277 1267 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1161 1267 IPR010844 -
Spst4g02277 1267 SUPERFAMILY occludin/ELL-like 1169 1231 - -
Spst4g02277 1267 Coils Coil 1197 1217 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 950 992 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 616 634 - -
Spst4g02277 1267 MobiDBLite consensus disorder prediction 1000 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02277 Spst-Chr4 63565440 63577392 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02277 - - gmx:102660010 1848.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02277 4 63565440 63577392 Spst4g02277 4 63565440 63577392 ECH