Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02237 ATGATTGGAAGCTTCAACCAGACTGATTCAATTGAGTGCTGTGAAGCCGGAATGGAGAAAGCTTATTCTCAGGAATCTGGTCCTGTCTTGAAGAAGTCCAAAACCAAAATTTTGGCTTCTAAAAATGAAGATAACTGTGAAATGGCAGAAAGCGAGGACAGACTTAGTGATATGCCAGACTGTCTTATCCATCATATCTTGTCATTTCTGGAAACAAAGGATGCTATTCAAACTTGCATTTTATCAAAGAGGTGGAGGTATCTTTGGGCTTCAGTTCCCTGCCTGAATTTTAGCAGCAAATCATTCACGCGGTTGGTTGACTTCAAGAAGTTTGTGCTGTGGGTTCTAAACCACCGCGATTCATGTCATGTCAAACTTCTTGTTTACTATCGCTTTGGAGTAGATTATGCGACAGATCAACATCTATTGAATAAGGTTATTGAGTATGCAGCATCACATGGGGTTGAAGAAATCAAAATCAATCTCCGTGCAAAAACATCTGGTAGTCCTCCTGTTGAAATTCCTTTGTCTCTATTTTCTTGCCAATCTTTGAAAAAGCTTGAGTTAAAAGATTGCCATCCTACAAATGTGTCATCCCCTATAGGTTGCAAATCATTGGACTTGTTGCATCTGGAACAGTTTGCAATGGATCCTGCTGCAGCCGATTTTTCAAATCCATTTGCAAGCTTGGCAGAACTATTTGGTTTTACAACACTGACAACTCTGCATCTAAATAACTTCACTCTGTGTTATACAGGAATTGACTGTCTTGACCCATTTGCTAATTGTGTGCATTTGAAGAATTTGCACTTAAGTGAAATGTCCTTTAAGTCAGACTTGAACCCTAAGGATTTTGTGATATCTGCTCCCAAACTCAGTAACTTGAATCTAATGTGCAACCGCTTTAAATGCAAAATTGTAGTTGCTGCACCACAGCTTTCCAATTTCACTTACTTGTATTCTACACCTTGCGCCTTCTTTGAGTTTCGACTTCCATCTTTGGATGGCTTGATCATTGATATACATGAACCACATGATCGATTTGAAAAATGTCGTCGAAGGAAAAGAGAGGAGACTTTACATGGTTTGATCAATATGTTACGCGGATGTCATAGTGCAGAAGCTGTTAAACTGTCTTTCTGCACAGTTTCGGTTACTTGTGGGACTTCAGCCCTATTAAAGCCAGAATGTTTGTCTCCTAGTAAATTGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTCATCAACAACCTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTTGAGATTGTGTCTGTTTAG 1329 0.3928 MIGSFNQTDSIECCEAGMEKAYSQESGPVLKKSKTKILASKNEDNCEMAESEDRLSDMPDCLIHHILSFLETKDAIQTCILSKRWRYLWASVPCLNFSSKSFTRLVDFKKFVLWVLNHRDSCHVKLLVYYRFGVDYATDQHLLNKVIEYAASHGVEEIKINLRAKTSGSPPVEIPLSLFSCQSLKKLELKDCHPTNVSSPIGCKSLDLLHLEQFAMDPAAADFSNPFASLAELFGFTTLTTLHLNNFTLCYTGIDCLDPFANCVHLKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFTYLYSTPCAFFEFRLPSLDGLIIDIHEPHDRFEKCRRRKREETLHGLINMLRGCHSAEAVKLSFCTVSVTCGTSALLKPECLSPSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVSV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02237 442 SUPERFAMILY L domain-like 174 404 - -
Spst4g02237 442 CDD F-box_AtFBL13-like 55 90 - -
Spst4g02237 442 PANTHER OS11G0201299 PROTEIN 236 408 - -
Spst4g02237 442 ProSiteProfiles F-box domain profile. 52 105 IPR001810 GO:0005515
Spst4g02237 442 SUPERFAMILY F-box domain 51 107 IPR036047 GO:0005515
Spst4g02237 442 Gene3D - 39 95 - -
Spst4g02237 442 Gene3D Ribonuclease Inhibitor 142 335 IPR032675 -
Spst4g02237 442 SMART fbox_2 58 98 IPR001810 GO:0005515
Spst4g02237 442 Pfam F-box domain 55 92 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02237 Spst-Chr4 63154228 63155643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02237 41 219 EF-hand Containing Proteins AT5G41840 30.000 1.48e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02237 - - vun:114167379 835.484