Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02228 ATGGCATCTCAAGGTTTGTGTCCTTCGATAAAAAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAGAAGTTTGTATTTAGTAAGACTGTTAAGACAAATGCTCGTACAGAAGCTGAGGTAACGCTACTTGAGAACAATATCATAATTTACAAATTTGTGCAAGACCTGCATTTCTTTGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCAGTACTTCAAGGTTTCTTTGATGCAGTCACCCTTCTGTTGAGGAGCAATGTTGATAAAAGAGAGGCCCTTGAGAACTTGGATCTCATTCTGTTGTGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGACCTCTTATTGCTGAAAAAGTGACCTCTCATAGCTTGGATGCTGATGCCCCCTTGTCAGAGCAGACACTAACTCAAGCTTGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATAA 543 0.3996 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFSKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02228 180 CDD Zeta-COP 11 146 - -
Spst4g02228 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Spst4g02228 180 Gene3D - 4 150 - -
Spst4g02228 180 FunFam Coatomer subunit zeta-2 4 150 - -
Spst4g02228 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Spst4g02228 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02228 Spst-Chr4 63002775 63005797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02228 K20472 - gmx:100775726 338.576