Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02198 ATGGCGAGCAATAATGGAGGAGAGTCAGGGGAAAAGATGGAAGGGTGGAAAAAAGGTTTGAAATGTGTAGGAAATTGGATGACACCCAAGGACAAGAATGAATGGTTGAAGGACATGAGGGGAATGCTGAGTTTGATGGCGACAGTAATTGCAACTATGACCTTTCAAAGTGGTATTAATCCACCAGGTGGCGTTTTGTCTCCAGACGAGGATAATGGAGTCAAATGCCAGAATCAGTCATGTCCTGGACAATCTGTTCTTGCTCTGGTTTATCCAGACGACTATAAAATTTTCCTTTACTGCAACACGATATGCTTCGTTTCATCTTCAGCTGTTTGTCTCTTGCTTGTGAGTGGATTTCCTCTGAGAAACCGGTTTTTCACCTGGCTCTTGTCTATAGGGATGTGCGTCATCCTCAGCACCCTCTCTCTAACCTACTTGTTCGGTGCACAAATGGTTGCCCCTGGTTGGAATAATTTATTAACCATGTACGGACTCATTATTGTAGTGTGGTTGATACTGTTGGTACTCATCGCAATCTTCCTTTTCCTGCGCCTATTTGTTTGGATTCTCACTAAATGCATCGAGTGA 591 0.4349 MASNNGGESGEKMEGWKKGLKCVGNWMTPKDKNEWLKDMRGMLSLMATVIATMTFQSGINPPGGVLSPDEDNGVKCQNQSCPGQSVLALVYPDDYKIFLYCNTICFVSSSAVCLLLVSGFPLRNRFFTWLLSIGMCVILSTLSLTYLFGAQMVAPGWNNLLTMYGLIIVVWLILLVLIAIFLFLRLFVWILTKCIE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02198 196 PANTHER CASKIN 27 188 - -
Spst4g02198 196 Pfam Domain of unknown function 34 150 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02198 Spst-Chr4 62700541 62701131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02198 3 155 Miscellaneous Gene Families AT1G34050 25.466 9.97e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02198 - - gmx:100815832 216.468