Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02193 ATGGAAGATCCATCAGTTACGATGAACACTGGAAGGGAGAAGATAGACAAGACAAAATGGTGGAGAAAATATGTAAGCAATGTAGGAAACTGGCTGACACATAAGGATAAGGATAAATGGTTGAAGAACATAAGGGGTAACCTGAGTTTGGTGGCTACGGTAATCGCAACAATCACCTTTCAAAGTGCACTAAATCCACCAGGTGGAGTCAGACCAGCAAAAGACGGCGGAGAAGATTTGGTTTGTCCAGCAAATGGCAGTCCATGTCCTGGAGAATCTGTCCTAGCTTATACAACGAAAGATGAGTATTCCTGGTTCCTCATTTGGAACACTACTTGTTTCCTATCATCTTCGGCTGTTTGTCTCTTGCTGGTCAGTGGATTCCCTCTTAACCACAGATTTTTCACCTGGCTTTTGTCAGTTGGCATGTGCATCACCATCACTAGTCTCACTCTTACCTACATGTATGGTGCTCAAATGGTCACCCCTGATCCTGTTTGGGCCGCATCCAACTCCATGTTTCTAAAAGTTATTTATATTTGGACTTCCCTGCTAGGACTAGTCACCTTTGTTCTTTGCCTGCGCCTGTTTATTTGGATTGTCACTAATCGGGATGGCAAAAAACCTAGAAAATAA 636 0.4324 MEDPSVTMNTGREKIDKTKWWRKYVSNVGNWLTHKDKDKWLKNIRGNLSLVATVIATITFQSALNPPGGVRPAKDGGEDLVCPANGSPCPGESVLAYTTKDEYSWFLIWNTTCFLSSSAVCLLLVSGFPLNHRFFTWLLSVGMCITITSLTLTYMYGAQMVTPDPVWAASNSMFLKVIYIWTSLLGLVTFVLCLRLFIWIVTNRDGKKPRK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02193 211 PANTHER CASKIN 34 195 - -
Spst4g02193 211 Pfam Domain of unknown function 39 158 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02193 Spst-Chr4 62658950 62659585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02193 6 186 Miscellaneous Gene Families AT1G10340 25.258 1.31e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02193 - - vra:106773979 302.367