Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02182 ATGGTCCCTGGTTCCAAAACTGAGGGTGGCACTGGTACCCACTTGCTGTCTGCCAGGGTGCGCAAAACCATTCAATCCATCAAGGAAATCGTGGGGAATCATTCAGATGCTGATATCTATGTCGCCCTCAAGGAAACCAACATGGATCCTAACGAAACCACTCAGAAATTGCTCAACCAAGATCCATTTCATGAGGTGAAGAGAAGGAGAGACAGAAAGAAAGAGACTCAAAATGTTGGAAACAATGGTTCAGCTGACTCACAAAGGCCATCTGAGAATAATAGTGGTCAAGGAATGAAATTTCACACCCCTTCTGAACACAATTTTCGAAGAACAAACTATTCTCGTAGTACTTTACATGGCATCAGCAGAGAGTTCCGTGTTGTAAGAGACAACAGAGTAAATCATATATACAAAGAAGTAAAGCCTCTTTCACCGCAGCACTCAACATCTGCCAGTGAGCAGTTAAATGTAAACACATCTGAAAAGGGCACATCAGCTTCCATCAGTCATAGGTCCTCTGGCGCTAGGAATTCATCCCAAGCACTGAATGGTCCTTCTGATTCGCATGCTAGATACCTGAAAGATGCTCTTCCAAATACCATTGATAGAAAAATTGCATCTGAGGACAAGGATAAGGATAAGCAAGGCAACAATTCAAATGCAGCAGGACGGGTGCAACCAATTAAGCCTAACAACATCCATCAAAATCCTGCAACAGTGGCATCAAGCAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACTGATCCAGTTCATGTGCCCTCTCCTGATTCTAGATCATCAGGTGTGGTTGGAGCAATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGGAGACAGTCTTCAGACCACAAAGTAAAACAATCATTTGCTCCTAGTAGCTCTTATGTTGTGGGAAAAGATGGTACATCTGCAGATTCTTTTCAATCAGTTGCCGCTTTCTCAAAGACTGAACAATTTAGTCAAACTAATGTAACTGAACCTTCATTATCTGGTGTGCCAGTTAGCAGACCGTCTGTGAACAACCAGTATAATAATAGACCACATCAACAACTTGTGGGACATCAAAGAGTTTCCCAACAAAATAAAGAATGGAAGCCTAAATCTAGCCAGAAGTCAAACAGTAATAATCCTGGAGTAATTGGAACCCCAAAAAAGGCTTCTGCTTCTGCTTCACCTCCAGCAGAAAATTCGAGAGATATAGAATCAGATGCAGCAGAGCTTCAAGATAAACTTTCAGAAGTAAATATATATGAGAACCAAAATGTGATTATAGCACAGCATATTCGAGTTCCAGAGACTGATCGCCGTCGGCTTACCTTTGGTACCATTGGGACTGAACTTGATTCTTCAAGGCTTCAACCTAAGTATCACATAACAGGAGCCTCTGAAAAATTAAATGAGGAATTGGCTGCAAGCTTGACAGTAACTGCTCCAGAGTTGTCCCCTGATGATGTTTCTGGGAGCAAACAGGTGGACTTAAGGGATGAACACATTAGAAATTCTGGGTCTGACTCTCCAGTATCTGGTGCTGCTTCTGAGCAACAATTGCCCGATAACAAAGACTCTTCAAACACTCAGAATCTGGACAATTATGCCAACATTGGGTTGGTTCGTGAAAGCAGTCCACCCTATGCACCTTCAGAATCTCAGCAGCAAGATTCTCATGATATGCCAGGCTTTGCGGCGTATGATCCTCCAACTGGGTATGATATTCCTTATTTCAGACCTACAATTGATGAAACTGTACGAGGGCAGAGTTTGTCATCTCCTCAGGAGGCTTTGATCTCCCATGCAACCAATAATACTCCTGCTTCCACAATTGCCATGGTACAACAACAGCAACCTCCTGTGCCGCAGATGTATCCACAAGTTCATGTTTCTCACTTTGCTAATCTTATGCCATATCGTCAGTTTCTGTCCCCGGTTTATGTTCCACCTATGGCAATGCCTGGATATTCGAGTAATCCTCCCTACCCTCACCCAACCAATGGCAACAGTTACCTGTTAATGCCTGGAGGTGGTTCCCATCTCAATGCCAACAACCTCAAATATGGAGTTCAACAGTTCAAGCCTGTGCCTGCTGGAAATCCTACAGGGTTTGGAAATTTTGCTAGTCCAACTGGGTATGCCATGATAACTCCCAGTGTGGTTGGTGGTGCAACAGCTTTAGAAGATTCATCTCGAGTCAAGTACAAGGATAATCTTTATGTCCCAAATTCTCCGGCTGAGACATCAGAAATTTGGTTACAAAATCCAAGGGATCTTCCTGGAATGCAATCTGCTCCATACTATAACTTGCCAGGGCAAACACCTCATGCAGCTTACATGCCTTCACATACTGGTCATGCTTCCTTCAATGCAGCTGCAGCTCAGTCTTCTCACATGCAGTTCCCTGGCATGTACCACACTCCTCCACAGCCAGCTGCCATTGCTAGTCCTCACCATTTAGGAGCACCAACTATTGGCAGCAATGTTGGAGTTGGGGTGGCTGCAGCTGCTCCAGGAGCACAGGTTGGTGCATATCAGCAGCCCCAATTGGGCCACATCAATTGGACAACCAATTTCTGA 2589 0.4434 MVPGSKTEGGTGTHLLSARVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKETQNVGNNGSADSQRPSENNSGQGMKFHTPSEHNFRRTNYSRSTLHGISREFRVVRDNRVNHIYKEVKPLSPQHSTSASEQLNVNTSEKGTSASISHRSSGARNSSQALNGPSDSHARYLKDALPNTIDRKIASEDKDKDKQGNNSNAAGRVQPIKPNNIHQNPATVASSSSAVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRRQSSDHKVKQSFAPSSSYVVGKDGTSADSFQSVAAFSKTEQFSQTNVTEPSLSGVPVSRPSVNNQYNNRPHQQLVGHQRVSQQNKEWKPKSSQKSNSNNPGVIGTPKKASASASPPAENSRDIESDAAELQDKLSEVNIYENQNVIIAQHIRVPETDRRRLTFGTIGTELDSSRLQPKYHITGASEKLNEELAASLTVTAPELSPDDVSGSKQVDLRDEHIRNSGSDSPVSGAASEQQLPDNKDSSNTQNLDNYANIGLVRESSPPYAPSESQQQDSHDMPGFAAYDPPTGYDIPYFRPTIDETVRGQSLSSPQEALISHATNNTPASTIAMVQQQQPPVPQMYPQVHVSHFANLMPYRQFLSPVYVPPMAMPGYSSNPPYPHPTNGNSYLLMPGGGSHLNANNLKYGVQQFKPVPAGNPTGFGNFASPTGYAMITPSVVGGATALEDSSRVKYKDNLYVPNSPAETSEIWLQNPRDLPGMQSAPYYNLPGQTPHAAYMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQPAAIASPHHLGAPTIGSNVGVGVAAAAPGAQVGAYQQPQLGHINWTTNF 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02182 862 MobiDBLite consensus disorder prediction 61 77 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 144 187 - -
Spst4g02182 862 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 862 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 509 541 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 505 569 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 204 218 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 324 389 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 219 262 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 204 270 - -
Spst4g02182 862 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Spst4g02182 862 MobiDBLite consensus disorder prediction 324 408 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 78 103 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 139 192 - -
Spst4g02182 862 MobiDBLite consensus disorder prediction 51 116 - -
Spst4g02182 862 SUPERFAMILY UBA-like 19 78 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02182 Spst-Chr4 62567419 62575577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02182 - - gmx:100807606 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02182 4 62567419 62575577 Spst4g02182 4 62567419 62575577 ECH