Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02171 ATGGCGGAAACCGCATCACCCTCGTCCAAACCCTCACCAATGGACCCTCAAAACCCCGCACAATCTTCCAACCCTACAATCCCTTCCCCTTCGCACAACAACATGGCTTCACCCTCCCTCCCTCCGCTTCCGCAAGACCAACAACAACAACAGCAGCAGCAAAATCTTCATCAGCAATTGAGTCCCCCTCAACAACAACAACAACAACAACAACAACCGCTCGTGTCGTCGCAAGCGATGAACAGCATCAACGGCATGAACCCTATCTCCAATTTTCAACTCCAGCAGACGCTGCAGCGATCGCCTTCCATCTCGCGCCTCAATCAAATTCAGCCTCAGCAGCAGGCGCAGCAGCAGCAGCAGCAGTTCGGCGTCATGCGCCACCAGGCCGGATTGTACGGCGGACAGATGAGCTTCGCAGCCGCGGGCGGTGGAGCGAGCCAGCAGCAGCAGCAGCAGTTGGGCGGGTCCAATTTGTCGCGGTCCGCGCTGATAGGGCAGACCGGACACTTCCCCATGTTGTCCGGAGCTGGCACGCAGTTTAACTTGCTCTCCTCGCCAAGGCAAAAAGGTGGGCTAGTTCAGCCGTCTCAATTCTCCTCAGGTAATTCTGCTGGACAATCACTGCAAGGAATGCAAGCAATGGGCATGATTGGATCACCAAATCTCACTTCACAACTACGAGCTAATGGAGCCCTGGCTTATGCGCAGCAGTTGCGAATGAGTCAGGGTCAAATCAGGCAGCAAATATCACAGCAGAGTTCACTTAACACTGGACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAATTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAACCAGCAATGGTTCATAACTCCTTAACACAGCAACAGTGGCTTAAACAAATGCCAGCAATGTCTGGCCCTGGCTCACCATTGCGTCTTCAACAGCAGAGGCAGCAGTTGGCTTCTTCTGCTCAACTGCAACAAAACTCTATTGCCCTCAATCAACAGCAATTGTCCCAGCTGATTCAGCAACAGAAATCCATGGGGCAGCCTCAGCTGCATCAGCAGCAGCAGCAACCTCAACAGCTGCAACAGCAGCTTATACAGCAGCAGCCACAACAACAGTCTCAGCCACAGGCTTCTGTCCATCAACAGCAACAATCTCCAAGGATGCCAGGACCTGCAGGCCAAAAGTCATTCAGTCTAACAGGATCACAGCCTGATGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGTCAAGGAACTGAAGCAACAAACCAAGTCCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAAGGTACGCTGGATCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCCGATGATTTCATTGATTCTAGATGTGGGGGTAGTTGCTTGATGTATGTTGAAAAGCCACTTTACTTGCATTCATCCCCACCCACTTTAGTTGCTGCCTCTTTAGGACCTGCTTTAATTGCAGCCTCAAAAGATGAAAAAAATTGGGATTTAACAATTCCTGGATATTCAAGTGAAGATAAAAAGTATCAAAGCAAACCTCAATTAAATGACCTCCACAAGAGGCGCCTAGATATGATTCGCACGATGATGGAATCCTCGGCCTCTGATTCAAATATTAACAGTTCTAAAGAGTTGAGTAGACAGGGCATTCCTAATTCTACCCCAGTGGGAGCTCACCATCTAGTAAGACCCTTGAGTTCAGAGCAGTTGGTTTCTCATTCAGCTGGTTCTCAAATGCTACAGCAGATGACAAGTCCCAACAAGTCAATCTACTCTGTTTATCTACTGCACTATAAAGTACCACGATTTGAGCGGTTGATTAGTTTTCTAACCCAGTTGTTGTCTTATGATTTTTTTCGTATCAGGCCTGAGAAGAGATTGCTTGCTGAAACTGATTAG 1947 0.4864 MAETASPSSKPSPMDPQNPAQSSNPTIPSPSHNNMASPSLPPLPQDQQQQQQQQNLHQQLSPPQQQQQQQQQPLVSSQAMNSINGMNPISNFQLQQTLQRSPSISRLNQIQPQQQAQQQQQQFGVMRHQAGLYGGQMSFAAAGGGASQQQQQQLGGSNLSRSALIGQTGHFPMLSGAGTQFNLLSSPRQKGGLVQPSQFSSGNSAGQSLQGMQAMGMIGSPNLTSQLRANGALAYAQQLRMSQGQIRQQISQQSSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLTQQQWLKQMPAMSGPGSPLRLQQQRQQLASSAQLQQNSIALNQQQLSQLIQQQKSMGQPQLHQQQQQPQQLQQQLIQQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSRCGGSCLMYVEKPLYLHSSPPTLVAASLGPALIAASKDEKNWDLTIPGYSSEDKKYQSKPQLNDLHKRRLDMIRTMMESSASDSNINSSKELSRQGIPNSTPVGAHHLVRPLSSEQLVSHSAGSQMLQQMTSPNKSIYSVYLLHYKVPRFERLISFLTQLLSYDFFRIRPEKRLLAETD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02171 648 CDD TAF12 433 477 IPR003228 GO:0005669|GO:0006352
Spst4g02171 648 MobiDBLite consensus disorder prediction 548 569 - -
Spst4g02171 648 Pfam Transcription initiation factor TFIID subunit A 434 475 IPR003228 GO:0005669|GO:0006352
Spst4g02171 648 Gene3D Histone, subunit A 428 481 IPR009072 GO:0046982
Spst4g02171 648 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 84 559 IPR037794 GO:0000124|GO:0005669|GO:0046695
Spst4g02171 648 MobiDBLite consensus disorder prediction 548 574 - -
Spst4g02171 648 MobiDBLite consensus disorder prediction 350 432 - -
Spst4g02171 648 MobiDBLite consensus disorder prediction 180 208 - -
Spst4g02171 648 MobiDBLite consensus disorder prediction 1 87 - -
Spst4g02171 648 SUPERFAMILY Histone-fold 431 476 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02171 Spst-Chr4 62453795 62461077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02171 K03126 - gmx:100783017 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02171 4 62453795 62461077 Spst4g02171 4 62453795 62461077 ECH