Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02168 ATGAACGAGAAACAGGGACTATCGTGGAGCGCATCACTGTTCTGTGAACTGAGGACAATGTCCACTGAATCGCCAAGTTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAACAATCCAAGTTTAAGATAGCAGGAACTGATAAATTCGCGAAAGTGATAGACTTTCTTCGCCGCCAGCTCCACAGGGAGACATTGTTTGTGTACGTCAATAGTGCTTTTTCACCAAACCCTGATGAATTGGTAATTGACCTGTTCAATAATTTTGGTTTTGATGGCAAACTGGTGGTCAACTACGCTTGCTCCATGGCTTGGGGCTAA 342 0.4474 MNEKQGLSWSASLFCELRTMSTESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02168 113 Pfam Ubiquitin-like autophagy protein Apg12 30 113 IPR007242 GO:0000045|GO:0005737
Spst4g02168 113 Gene3D - 24 113 - -
Spst4g02168 113 PANTHER AUTOPHAGY PROTEIN 12 21 113 IPR007242 GO:0000045|GO:0005737
Spst4g02168 113 SUPERFAMILY Ubiquitin-like 29 112 IPR029071 -
Spst4g02168 113 CDD Ubl_ATG12 30 112 - -
Spst4g02168 113 FunFam Ubiquitin-like protein ATG12 24 113 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02168 K08336 - gmx:100527905 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02168 4 62395670 62398447 Spst4g02168 4 62395670 62398447 ECH