Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02151 ATGGCGGTTTCCACGATAGCCTTGTACGCAAGTCCACCGAGCAGCGTGTGTTCTACGCCGCACCCTTGCCAGATCAACGCTCACGCTTCCTACGAGTTCGAATTGGGGTCACGATCTTCGTCTCCGGCGGCGTCGTCGGCTCCGGCGTCGACGTCGCAGAAGCCGGTGATGGGTGGCCTCTCGTGCCTCTTCTCGTCTCCGGCACCGGCGGTGAAACACACGCCGTTATCGTCGAGTTTTACTGGGGAGGAGGACGATTTGAAGGAGTTGGGCAGTTCCTTCTCGTATTCTCCGAGCAAGTTTGGAGGGTCTTCGTGGAAGAGGGATCAGAGTCCTGTGTCGGTTTTTCATGGTCCTGTTTCGTGTAGTAGTAGCAGCAGAAGTTCCATTAGTTCTACTTCTGCGAGAAGTATCAGGGGTGGGACTAGTGGGTTGTTTCATGGGTTTGTGAGGAATGCGTTGGGGTCTTGTTTGGATTATGACTTAGATGCCGGTGATTCTTCTGCAGCGCTTGTGGATGAGTTGACCTTTAATTTAGAGGATAATTTCGTGGAGGGTGGGTTTCATTTTGAACCCTATGCTAAAAAGTTACTGCTGGGGGCGCAGTTGAGACACAAGATCTTCTGTGAGGAGTTTGTCATCAAGGCCTTTTGTGAAGCTGAGAAGGCACACAGAGGGCAGATGCGGGCTAGTGGGGATCCTTACTTGCAGCATTGTTTGGAGACTGCTGTGTTGCTGGCTTTGATTGGTGCCAATTCAACTGTTGTGGCGGCGGGGCTCTTGCATGACACGCTGGATGATGCTTTTCTGACGTATGATTATATATTTGGAACATTTGGCGCTGGAGTTGCTGATTTGGTTGAAGGGGTATCTAAACTGAGCCACTTAAGCAAGCTGGCTCGAGAAAATAATACAGCTTGCAAGTCAGTTGAAGCAGATCGCTTGCATACTATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCAGATCGATTACATAATATGATGACATTAGATGCGTTGCCAGTGACCAAGCGACAGAGGTTTGCGAAGGAGACTCTGGAGATTTTTGCACCACTGGCCAATCGCTTAGGAATTTCTAGTTGGAAAGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAAGCCAGCACGAGGAGCTTTCATCAAAGCTTGTGGAGTCGTACGATGATGCAATGATTACTTCTGCAATAGAGAGATTAGAGCAAGCTCTTAAAGATGAAGGCATATCTTATAATGTCATTTCTGGGCGGCATAAGAGCTTGTATAGCATTTATTGCAAGATGTTGAAGAAGAAACTTACCATTGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGACAAGGAAGAAGACTGTTATAAAGCCTTAACAACTGTTCATCGGTTGTGGTCTGAGGTACCTGGAAAGCTCAAAGATTATATAGGTCGCCCCAAGTTCAATGGATATCAATCTCTGCATACGGTGGTGATGATGGGTGAAAGCAAGGTTCCCCTTGAAGTTCAAATTCGAACAAAAGATATGCATTTGCAAGCAGAGTTTGGATTTGCTGCTCACTGGAGATACAAGGAAGATGATTGCCAGCATTCTTCATTTGTGCTTCAGATGGTGGAGTGGGCTCGATGGGTGGTCACCTGGCAGTGCGAAGCAATGAGTAGAGATTGTTCATCTGTTGGATATGCTGATTCAGTCAAGCTCCCATGCAAGTTCCCTTCCCATGCTGCTGATTGCCCATATTCTTATAGGCCTGATTGTGGTCAGAATGGGCCCGTGTTTGTTATTATGATCGAGAATGACAAGATGTCTGTTCAAGAATTCAGTGCAAACTCAACCATATTGGATTTGTTGGAAAGAGCTGGGCGCGCAAGCTCCAGGTTGACAACATATAGGTTCCCATTGAAGGAAGAGTTGAGGCCAAGGCTGAATCACAAGCCTGTGAGTGATCCCAATAGCAAGTTGAAGATGGGAGATGTTATTGAACTTACACCAGCCATACCTGACAAGTATCTTACAGAATACAGGGAAGAAATCCAGCGTATGTATGATCGAGGGCTAACCGTATCAAGCATGGGAACTTCTACAAACACCATGGTTGGCTCAAGAAGTTGA 2151 0.4668 MAVSTIALYASPPSSVCSTPHPCQINAHASYEFELGSRSSSPAASSAPASTSQKPVMGGLSCLFSSPAPAVKHTPLSSSFTGEEDDLKELGSSFSYSPSKFGGSSWKRDQSPVSVFHGPVSCSSSSRSSISSTSARSIRGGTSGLFHGFVRNALGSCLDYDLDAGDSSAALVDELTFNLEDNFVEGGFHFEPYAKKLLLGAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDAFLTYDYIFGTFGAGVADLVEGVSKLSHLSKLARENNTACKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVTKRQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDCYKALTTVHRLWSEVPGKLKDYIGRPKFNGYQSLHTVVMMGESKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKLPCKFPSHAADCPYSYRPDCGQNGPVFVIMIENDKMSVQEFSANSTILDLLERAGRASSRLTTYRFPLKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGTSTNTMVGSRS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02151 716 CDD NT_Rel-Spo_like 409 528 IPR007685 GO:0015969
Spst4g02151 716 Gene3D Hypothetical protein af1432 202 386 - -
Spst4g02151 716 Pfam HD domain 220 370 - -
Spst4g02151 716 ProSiteProfiles HD domain profile. 235 339 IPR006674 -
Spst4g02151 716 Gene3D Beta Polymerase, domain 2 389 520 IPR043519 -
Spst4g02151 716 SUPERFAMILY HD-domain/PDEase-like 196 386 - -
Spst4g02151 716 ProSiteProfiles S4 RNA-binding domain profile. 654 691 - -
Spst4g02151 716 FunFam GTP pyrophosphokinase RelA 387 520 - -
Spst4g02151 716 Pfam Region found in RelA / SpoT proteins 429 539 IPR007685 GO:0015969
Spst4g02151 716 SMART RelA_SpoT_2 429 540 IPR007685 GO:0015969
Spst4g02151 716 CDD HDc 233 361 IPR003607 -
Spst4g02151 716 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 115 681 - -
Spst4g02151 716 SMART hd_13 231 348 IPR003607 -
Spst4g02151 716 FunFam GTP pyrophosphokinase RelA 197 386 - -
Spst4g02151 716 SUPERFAMILY Nucleotidyltransferase 391 559 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02151 Spst-Chr4 62292312 62296157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02151 230 537 EF-hand Containing Proteins AT3G17470 30.699 8.20e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02151 K00951 - gmx:100787301 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02151 4 62292312 62296157 Spst4g02151 4 62292312 62296157 ECH