Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02139 ATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTACACTTTGAATCGGAAATTGCAGACTCAGGATGCAGTCGATGAAGATGTTGAAGAAAACGAGAGTGAAACGCCCACTGATACATCGTTAGGCATTACTCGTGTTTCTCATCGGTTAATCCAAGCCCCTGGTACATGGTTGGAGACAATTTCAACATTGTCAGAGACTCTCAGGTTCACGTATTCGGAGACACTTGGGAAATGGCCAATTGGGGATTTGGCTTTTGGTATCAGCTTTCTGCTCAAGAGGCAGGGGAACTATCATGTTGACAGTGAATTTTGTGGTAAGGATAGTGTACAACTGAAAGGATCTGAGATCACTGCTGAACTTAAGTATCTCTTGAAATTGTTGACACTGTGTTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACAATGAAGAAAATGTTCTCCTTCGAGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACTATAATAGCTGATCATGAGATGAAATGCCTTTTGCTATTGATTCGTGGCACGCATAGTATCAAGGATACTCTAACAGCTGTTACAGGAAACGTGGTACCATTCCATCACACTGTTGTTCATCAGGGGGGTGTCAGCAATTTGGTTTTGGGTTATGCCCATTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGACTATAAAGTCAAGATTGTTGGGCACTCTTTAGGTGGAGGCACTGCAGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGAACTGTCTGTCACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGCGACAGTTTTATTACTTCTATTATCAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGATTTAAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTCTACCGTTCTGCTTCAGCGTTAGGTTCTCGCCTCCCATCAATTGCCACTGCTAGAGCGAAAGTTGCTGGTGCTGGGGCCATTTTGCAGCCAGTTTCTAATGGTACTCAGGTTGTGATGAGGAGAGCAAAGAGTATGGCTCAGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATAGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCCAAGGACGGGGGAAGTCCCCCTACATCTTCCTCTACCAACCTTAACAGTTTGGATCCACTTCTTGGTTCCCCCAAGAAGGCGATTAATTCAACAAATATGAACCTTCCTGTATCTTCATCTATAGAAGAGTGGTCTTCTGAGATTGAATGTGGCAATGAAAGTTGTTCTGATACTGAGCTGGATGTGGATCATGGTGATGGTCAGAACGTAATGGACCATGACAGATATGAGGATCAGATGAGTGAAGTGGATTTATGGCATCAACTGGAGCATGAGCTGTATGACGGTCCTGAAGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAGCCATAGCAGATGAAGTAGATCAAGCCCAGAGTTCTGCATCAGTAATGAAAGAAATCCACAGATTTTTCCCTCCAGGAAAGATAATGCACATTGTTACACTCCATTCTGACACGGAGCATGAAAATGATGATAGCCCAACCTCTGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTATCTAACTTCCAGGTCTTTATATAGTAAACTTAGACTCTCACAGAGAATGATCAAGGATCACTTCATGCCTGTTTATAGAAGGCAAATTGAAAGGCTAATAAAAGAGCTTGAGGAAGAATCTACCGAGGGTCATGATACACAAGAGGTAGTGTTGTAG 1980 0.4394 MATATMATAAGAAALLYYTLNRKLQTQDAVDEDVEENESETPTDTSLGITRVSHRLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYHVDSEFCGKDSVQLKGSEITAELKYLLKLLTLCWHFSKKPFPLFLEETGYNEENVLLREAKAGILKPAFTIIADHEMKCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVSNLVLGYAHCGMVAAARWIAKLATPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVTTCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMRRAKSMAQAAWARPNLNLSSWSCIGPRRRALSAYSNSKDGGSPPTSSSTNLNSLDPLLGSPKKAINSTNMNLPVSSSIEEWSSEIECGNESCSDTELDVDHGDGQNVMDHDRYEDQMSEVDLWHQLEHELYDGPEVEETDVVKEIREEEAAIADEVDQAQSSASVMKEIHRFFPPGKIMHIVTLHSDTEHENDDSPTSASSDSSELDETKIGIYLTSRSLYSKLRLSQRMIKDHFMPVYRRQIERLIKELEEESTEGHDTQEVVL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02139 659 Coils Coil 630 650 - -
Spst4g02139 659 Coils Coil 536 556 - -
Spst4g02139 659 Gene3D alpha/beta hydrolase 148 359 IPR029058 -
Spst4g02139 659 MobiDBLite consensus disorder prediction 429 454 - -
Spst4g02139 659 CDD Lipase_3 178 322 - -
Spst4g02139 659 MobiDBLite consensus disorder prediction 428 454 - -
Spst4g02139 659 Pfam Lipase 3 N-terminal region 51 131 IPR005592 GO:0016042
Spst4g02139 659 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 647 - -
Spst4g02139 659 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
Spst4g02139 659 SUPERFAMILY alpha/beta-Hydrolases 145 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02139 Spst-Chr4 62169148 62173890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02139 15 647 Acyl Lipid Metabolism Gene Families AT3G14075 62.578 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02139 - - gsj:114390808 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02139 4 62169148 62173890 Spst4g02139 4 62169148 62173890 ECH