Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02136 ATGGAGAGAACTTTAGCGATTATAAAACCAGACGGATTACTTGGTAACTACACTGATGACATCAAGAAAACAATTATAGAATATGGTTCCAGCATTTTTAAAGAAAAGATTGTTCAACTTGATGAGGCCACTGTAGAACAGTTTTATGCTCAGCACTCTTCAAAAAGTTTCTTTTCCAGACTTATAAAATACATGACAAGTGGACCAGTGTTGGTCATGGTTTTGGAGAAGGATAATGCTATTGCTGATTGGCGCGCTTTAATGGGCCCTACTGATGCCAGCAAGGCTAAGATTACTCACCCTCACAGTATCAGAGCAAAATGTGGATTGGATATAGAAAGGAATTGTGTTCATGGTTCAGACTCTCTCAAATCTGCACAAAGAGAGATTCCATTTTTCTTCAAGGAGCTGTCCTCAGGTCAATAA 426 0.3873 MERTLAIIKPDGLLGNYTDDIKKTIIEYGSSIFKEKIVQLDEATVEQFYAQHSSKSFFSRLIKYMTSGPVLVMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDIERNCVHGSDSLKSAQREIPFFFKELSSGQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02136 141 FunFam Nucleoside diphosphate kinase 1 140 - -
Spst4g02136 141 PRINTS Nucleoside diphosphate kinase signature 4 26 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Spst4g02136 141 PRINTS Nucleoside diphosphate kinase signature 68 85 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Spst4g02136 141 PRINTS Nucleoside diphosphate kinase signature 48 67 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Spst4g02136 141 PRINTS Nucleoside diphosphate kinase signature 115 134 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Spst4g02136 141 Pfam Nucleoside diphosphate kinase 2 136 IPR034907 -
Spst4g02136 141 ProSitePatterns Nucleoside diphosphate kinases active site. 115 123 IPR023005 -
Spst4g02136 141 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 1 139 - -
Spst4g02136 141 Gene3D - 1 139 IPR036850 -
Spst4g02136 141 SMART ndk_5 1 141 IPR034907 -
Spst4g02136 141 SUPERFAMILY Nucleoside diphosphate kinase, NDK 1 137 IPR036850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02136 Spst-Chr4 62147961 62149303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02136 K20790 - gmx:100500470 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02136 4 62147961 62149303 Spst4g02136 4 62147961 62149303 ECH