Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02126 ATGAACCTTTTACCAGGGAAACGCAAGCGTCAAGACCTATCGACGCTCTCTGCATCGATGACTAACGAGGAGCGCGTGGTGTACAACATCATTCGCGGGAAGAAGGAGATGGGGATATGGCAAGGGGAGATCAAAAGAGAAACCAACATTCCTGACAGTATATTGAAAAAATCCATCAAGTTGCTAATCTCCAAGACTCTCATCAAAGAGGTTGTGAACATCCAAAACAAGTCCAAGAAGGTGTTGATGGCCATGGATTTCGAACCTTCTAAAGAAATAACTGGTGGAGAATGGTATACCGAAGGCAGACTCGACACACAACTTATTGATGCTTTGTCGGATGTATGCTTAAAACTCATTTCTCGAAAAAAGGTTGCAACCCGTGATGGAATCCTCGAGTGGACTAAAACCTTAGGGAGTGAAGTTTTTCCTGGTGGAGTTAGTCCAGGACAGGTGGAACAAATTTTGAAAGTTTTGGTTATGGAAAATAAGTTACAAGAGGTAAACAGCACTGGCTTTGGGGATTTTTCATCCATTCCTGCGGGTGAAATTTGTTTCAGGTTGGCGAAGAAGGTAGGCACCAATGTTAAAGTTGGTGTCATGGCCTCTATTCCTTGTGGGGTTTGTCCTAGGCTTAAATTTTGTACACCCAATGGTATTATATCCCCAACAACTTGTCAATATTATCAGAAATGGCTGGACTTTTAA 708 0.4251 MNLLPGKRKRQDLSTLSASMTNEERVVYNIIRGKKEMGIWQGEIKRETNIPDSILKKSIKLLISKTLIKEVVNIQNKSKKVLMAMDFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISRKKVATRDGILEWTKTLGSEVFPGGVSPGQVEQILKVLVMENKLQEVNSTGFGDFSSIPAGEICFRLAKKVGTNVKVGVMASIPCGVCPRLKFCTPNGIISPTTCQYYQKWLDF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02126 235 Gene3D - 5 79 IPR036388 -
Spst4g02126 235 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 17 235 IPR016049 -
Spst4g02126 235 FunFam DNA-directed RNA polymerase III subunit RPC6 21 86 - -
Spst4g02126 235 Pfam RNA polymerase Rpc34 subunit 17 130 IPR007832 GO:0005666|GO:0006383
Spst4g02126 235 Pfam RNA polymerase Rpc34 subunit 146 234 IPR007832 GO:0005666|GO:0006383
Spst4g02126 235 SUPERFAMILY "Winged helix" DNA-binding domain 13 86 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02126 Spst-Chr4 62037770 62038477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02126 K03025 - gmx:100789276 330.102