Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02107 ATGGATTCAAATTCAACAAAGGAGAAGCTGCATAACAGTGTTGCTGTTGCAGATGGAGCTGACCTTAAATCTTGTTATATGCAGAAGTTCAGACTCTATGAGACTCGCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCATCCGAATTGAATATTGTTGAAGATTCAACAATATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGATACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATATTACATGCTGCTTATAACAAAGCGAAGGAAGATTGGCACAATCTGTGGGCACAATATATATGCTATCACAAAGAGTGAAATGGTTCCAATTCCACATGCTACCTTGCGATCGAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCAAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGCTTAGTCTTCAACGCAACTTATCTGATCAAAATACTACAGGACAATCACTCTATGAAACTCTTTTTGTTTGGAATGAATTCTTGACTCGTGGAATCAGGAATAGTCTCCAGAATACTTCATGGACTGTAGCATTAGTATATGGCTTTTTTAAACAGGTCAAACTTTCTATATCTGACAGTGAGCTCAATTTGACTATAATTGCTAGGCGCTCACGCCATTATGCTGGGACCAGATATTTGAAGCGAGGAGTAAATGAAAAAGGTAGAGTAGCTAATGATGTTGAGACAGAGCAAATAGTCTTTACAGAAGCTCGAGATGGACACCCAATGCAAATCAGTTCTGTGGTGCAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATTAAACCGGACATCATATTATCAAGGAAGGACTCGAATTTTGAAGCCACAAGACTTCATTTTGATAATCTTGTCAAAAGATATGGAAATCCAATTATTATACTGAACTTGATAAAGACTCGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAGCTGAGTTTGCAAATGCTGTTAGGTCTATTAATAAAAATTTGAGAGGAGAAAGTCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTGTTGGGACAACTGGGAAAAGTCGCTGCATATGCACTGAAGCTGACTGGCATCTTCTACTCTCCAGTGACACCAAATATGAATCTAGATGGATTAACTCAACATTCGTACTCTGAGAATAACAATGTCATTGATCATTGCATCACAGAACAAGCTAGCATAAATAAGAATAATGTTGATAAAGAAACAGAAGTTAGGAATTGTTATTACAGGGATGATGAGAACAAAGACTACAGTGTCAAACCCCAGATGCTTCAATCCGGGGTGTTGAGGACTAATTGCATAGACTGTTTAGACCGTACTAATGTTGCTCAATATGCTTATGGACTGGCTGCCCTTGGATGTCAGCTTCAAGCTTTAGGATTTATTGAGTCCCCAAATATTGATCTTGATAACCCTTTGGCCGAGGAATTGATGGAAATCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAACAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAACACAGTCTCAAGAATTTATTCGAACCCTACAGCGTTATTACAACAACACATATTTAGATGGTGATAAGCAAAAAGCAATTAACTTATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCTGCACTGTGGGAGCTAGATTCAGATCAGTATTACTCTGTCAAGAAACATGGCCTTTATTTAGCAGATGGCAGCGTTAGGTCAACTATGAAGAGATCTCTATCAGATGGTAACATTCTCAGCGAAAGTGACACCACAATTGGGAACTTGAATGTTACAAATTGTCAGAATTCATCTGAAAAACCTGATAAACGTTTCCTTTCGGGGTCTACTCCGGACATCTTTACTTGTGGAAGTGATATTTGTCATTGCAGACAGATAAATGGAGGAATGGTCAAGGGCCAACATTGTGAGAGTGATCATATTTGTTACGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATAGCAAATGAACTAATAACTACTGAGACATCTGCAAGTGAATCTGGATCCAGCCTTAAGGCAAGGCAGAGTGGAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAAGATTTGAACGTTGGGTAACTGAAGGGGAGATGCATTTTGTTAGAGAGAATTGA 2451 0.3962 MDSNSTKEKLHNSVAVADGADLKSCYMQKFRLYETRSKFYMIGRDKNRTFWRVLKIDRLEPSELNIVEDSTIYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAITKSEMVPIPHATLRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMLSLQRNLSDQNTTGQSLYETLFVWNEFLTRGIRNSLQNTSWTVALVYGFFKQVKLSISDSELNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQIRGSIPLFWSQEASRLNIKPDIILSRKDSNFEATRLHFDNLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKNLRGESRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMNLDGLTQHSYSENNNVIDHCITEQASINKNNVDKETEVRNCYYRDDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGCQLQALGFIESPNIDLDNPLAEELMEIYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQKAINLFLGHFQPQQGKPALWELDSDQYYSVKKHGLYLADGSVRSTMKRSLSDGNILSESDTTIGNLNVTNCQNSSEKPDKRFLSGSTPDIFTCGSDICHCRQINGGMVKGQHCESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELITTETSASESGSSLKARQSGEELNKDRKYSERFERWVTEGEMHFVREN 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02107 816 MobiDBLite consensus disorder prediction 772 795 - -
Spst4g02107 816 ProSiteProfiles Sac phosphatase domain profile. 166 561 IPR002013 GO:0016791
Spst4g02107 816 MobiDBLite consensus disorder prediction 772 786 - -
Spst4g02107 816 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
Spst4g02107 816 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 781 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02107 Spst-Chr4 61887048 61897379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02107 27 809 Acyl Lipid Metabolism Gene Families AT5G20840 56.020 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02107 K22913 - gmx:100806380 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02107 4 61887048 61897379 Spst4g02107 4 61887048 61897379 ECH