Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02092 ATGGATGCAGTGGACAAGACTTTTTCTGAGCTTGTCGGCATCGTTAAATCGTGGATTCCCTGGCGATCTGAGCCAGCAAATGTGTCTAGGGATTTTTGGATGCCTGACCAGAGTTGTAGAGTATGCTACGAGTGTGATTCGCAGTTCACCCTGTTTAACCGTAAACACCACTGTCGTCTATGTGGAAGGATTTTTTGTAACAAGTGTACAACAAACTCTGTTCCTGCCCCAAATAGCAACGAAAGGAACTCTTGGGATGAGTTGGAAAAGATTCGTGTATGTAATTATTGTTACAAGCAATGGGAGCAGGGCGTAGTTGCTTTTGATAACAGTGTTCCAGTTTCCAATATTGATAATAGTGCTTCGGCATCAACTACAAGTTTGGCTAGCAGTAAAACCAGTGCCACTGTAAACAGTAGTAATATTACTCTTTGCTCCATGCCTTATTCAGTTGGGTCTTATCAACAAATGCAACAGGGTTCTGTTCTGAACCTGCATAAACCACCTTTGAAGGGAAAAGACACGGATACTGATAGGGAAGGTTTATCAGCACTAGGAGGGAGGAGTGATCTTGTAGCAAATCTGGGAGACCCATTACCAAAGCAATGCGAATTCTCAATAAACAGGAGTGATGATGACGATGATGAATATGGTGTGTATCGGTCAGATTCTGATATGAGGCATTATCCTCAAGTGAATAACTACTATGGACAAGCTGATTTTGATGGGATAGGCATCATTGACGGTTCACAGAAAGTGGATCCTGGTGGAGAAAACATTAATCCAAAACTCCCTTCAAACTACACTTTTGACACACAGGGTTTGGAAGGAGCCCCAGTTATTGCAAAAAATGAAGATGAACCTGATATCTGTGATGAAAATGAAGCCCCTTCCTCATTATATGTCTCAGAGGACGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGACGAAGAAGATGAACATGAAGCTATTTTGTTTGATGATGACGATGATAATGATGGGAATGCCATTGGAGAATGGGGGTATCTGCGCAGTTCTAGCAGTTTTGGAAGTGGTGAATTTCGACAGAAAGATAGGTCAAACGAGGAGCACAAGAAGGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAGGTTGAGAACATACCTGTTGAAGATGATGACAAGAACAGTTGGTTGGAGATTGTCACATCTTTGTCATGGGAAGCAGCTACTTTATTGAAACCAGATATGAGCAAGGGTGGAGTAATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCGTGTGGGAATCGCATTGATAGTGTGCTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGACTCACCGGCGAATGACATCAAAAGTGGATAAACCTCGCATGTTGATCCTTGGAGGGGCTCTAGAGTATCAGCGCGTTTCCAACCTCCTATCTAGTGTAGATACCTTATTGCAGCAGGAAACGGACCATCTTAAGATGGCTGTGGCAAAGATAGCTTCACACCAGCCAAACATGTTGTTGGTGGAGAAATCAGTCTCACGATATGCACAGGAATATCTTCTGGCAAAAGACATAACTCTGGTCCTCAATGTCAAGAGACCACTTTTGGAGTGCATAGCACGTTGCACAGGTACTCAAATAGTGCCTTCAATCGATCATCTTTCATCGCAAAAGTTGGGTTACTGTGAATCAGTTCATGTTGAGAAGTTTCTTGAAGACCTAAACAGTGCTGGTTCGTGTGGGAGAAAAACAATGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTTGGTTTCACAATTTTACTTAGAGGAGCTGACAGGGAAGAGTTGAAGAAGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTATGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCCCTGCCTGAAATTCCATTAAACAGTCTGGCCCTTCCAGAACAAGCATCAGCCATTCAAAGGTCCATTTCAACAGTTCCTGGTTTTGGTGTTGATGAAAAACCTCAAGGGCATGAACCTGACACTGAACCACAGAGAACCAGAAGTGTCACAATTTCTGAGCTAGCATCTTTGACTTGCAGTACAGGGCCGTGTGTGTCCAGTGTTGCTTCTCAATCAATGCCACTTGGATCAAGTCTCAACCATTCAACTGCCTTTTACTCCTCCATTGTTGCTTCAGGAAATTCAATTCCAGAGGCACACCATAATAAGCTTCTTCCATGCACTAGAAGAGACAGAAATGGAATGGACTCTAAACAACCTGTGGTGGAAGAAACTTCTATAGTGGACAGCACCCTGGTCATTATGGATGATTCTACTGTAGATGACTGTGGAACTTCAGAGAAATTATATCAAGGCATGTCAATTGACACTGTACAAAATGATGATAGCAAAATCTCTACAAACCAGTTAAGTGGGTCTGGATCTTTATCTCCAAAAGATGTTCTAAACCATCCTGAGAATCTTGAAGTCACAAATGAAGAGTTTGTTCTCGAAAAGGAAGAGTTTCCTCCATCCCCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGTGTATGGAAGGGAACTGTGTGTGAAAGATCCCATCTCTTTCGAATTAAGTACTATGGCAGCTTTGATAAACCATTGGGTCGGTTTTTGCGGGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGAAATGCCATCGGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCAGTCAAGAAACTACCGGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGATGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGAATTGTAATGTCCGATGCTGCTTGGGGTTTATCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGGCATTCTTTACACAGAGATTGTCTTCGATTTTACGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTGGTTTTTGATTATGGGAATCAGGATTGGATACAGCAAGAATCAGAGGAGGTGGTCAACCGGGCAGAGCTTTTATTCTCTGAGGTACTCAATGGTCTTAGTCAAATTGGAGAAAAAAGATCTAATGCAGTTCAAATCAGTAATGGCCATAAAACACCTGAGTTAAGACGCCAAATTGCTGAACTAGAGGGCATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGGAATGGCCAACCGGGGATTGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTAATTTTTCAATCATACATGTGGGATCACCGCCTTATTTATGCAGCAAACTTGGCCAATTCCAGCAATGGATCTGGTTCAAGCAGTCCAATTTCAGAGGATAAGGATAAAGCTACTGATGAAAATCAGATGAGCATCAACTCTATCCATGGTGATCCAAAGCTTAATGAAAGTCCTAGTCTTGGAGGAGGAACCGTAGTGGTTGATGGAAAAATCTCACAAGATGATGCATTGCATCAAGAAAGTGACATGACCAAAAAGGAAAATAATGAGAAAGATGACAGACCTATTTCAAACAGCAAAAGCATAATTGATCAATCTGATCTCTTGGAACCTGAATTCGGTGTTCACAGATCTCTCTCTGATGGGCCATTTCCTGTCATACCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGTGAAAATCGCCCTGGATTTGGAATTCAAAGGGATAACAGTTCTATAAATCCTGATATACTCACGGCAGATGCTTTGTCGACTAGTGTACAGAAAGAAACATATTATCTAGGGGATCGCCTTGAAGATCAAAATGGTTCCAAGAGTTTTTATTCTTCTTTTAAAGGTCATGATAATATGGAAGACTCTTCAAGCTGGTTAGGAATGCCCTTCTTGAACTTCTATCGGCAATTTAACAAGAACCTTTTTGCTAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTACATGTCATCTTTCCGGAAGCAGGAACTCCAGGGTGGGGCAAGGCTGCTTCTGCCAGTTGGTGTAAATGAGACTGTAATTACTGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCGCCAGAATATCATTTCCAATTGACTGATGAAGGAGAAAGGCCAAGAGAAGGAAATGAGTTTGCTTCATCATATTTTTCTGACTCAGGCACCTTCCAGTCATTCTCTTCTATTGATGAAACAGCCTTTGATTCTCAGAAAAGTTTTGGATCGATAGAGGAAATGATATTTTCCATGTCTGGGTCTCGTAGTTCATCAATGTTTGACCCAATGTCATACAATAAGGCTTTGCATGCCAGAGTTTCCTTTGGAGAAGACGGTCCCCTGGGCAAGGTAAAGTATTCTGTGACTTGTTACTCTGCCAAGCGTTTTGAAGCCTTAAGAAGGGTGTGTTGTCCTTCAGAGCTTGACTATATAAGGTCTCTGAGTCGCTGTAAGAAGTGGAGAGCTCAAGGTGGGAAGAGTAATGTATTTTTTGCAAAAACATTGGATGATCGATTTATCATCAAACAAGTTACAAAAACAGAGCTTGAATCATTCATAAAATTTGGTCCTGAATACTTCAAGTATCTTTCTGAATCTATAGCCACTGGAAGTCCAACGTGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGAAAAGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGGACTGTAACACGACTTTACGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATTCTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCGATGCCAACTTCTCCTATATTCGTGGGAAACAAAGCAAAACGGTTGTTAGAGCGAGCTGTCTGGAATGACACTGGTTTCCTCGCTTCAGTTGATGTAATGGACTATTCTTTACTAGTTGGGGTTGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTACACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATACTTGGAGGACCAAAGAACACACCTCCAACAGTTATATCTCCTAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCGGATCAGTGGTCTCCTCCTTCTATTGCTGCTAGTAATTCCCAGTCTGATTTAGGTGAAGACAGCACACAATCTCGGACCCCAGCTGAATGA 5475 0.4175 MDAVDKTFSELVGIVKSWIPWRSEPANVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPNSNERNSWDELEKIRVCNYCYKQWEQGVVAFDNSVPVSNIDNSASASTTSLASSKTSATVNSSNITLCSMPYSVGSYQQMQQGSVLNLHKPPLKGKDTDTDREGLSALGGRSDLVANLGDPLPKQCEFSINRSDDDDDEYGVYRSDSDMRHYPQVNNYYGQADFDGIGIIDGSQKVDPGGENINPKLPSNYTFDTQGLEGAPVIAKNEDEPDICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEHEAILFDDDDDNDGNAIGEWGYLRSSSSFGSGEFRQKDRSNEEHKKVMKNVVDGHFRALVSQLLQVENIPVEDDDKNSWLEIVTSLSWEAATLLKPDMSKGGVMDPAGYVKVKCIACGNRIDSVLVKGVVCKKNVTHRRMTSKVDKPRMLILGGALEYQRVSNLLSSVDTLLQQETDHLKMAVAKIASHQPNMLLVEKSVSRYAQEYLLAKDITLVLNVKRPLLECIARCTGTQIVPSIDHLSSQKLGYCESVHVEKFLEDLNSAGSCGRKTMKTLMFFEGCPKPFGFTILLRGADREELKKVKHVVQYGVFAAYHLAMETSFLADEGVSLPEIPLNSLALPEQASAIQRSISTVPGFGVDEKPQGHEPDTEPQRTRSVTISELASLTCSTGPCVSSVASQSMPLGSSLNHSTAFYSSIVASGNSIPEAHHNKLLPCTRRDRNGMDSKQPVVEETSIVDSTLVIMDDSTVDDCGTSEKLYQGMSIDTVQNDDSKISTNQLSGSGSLSPKDVLNHPENLEVTNEEFVLEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLVFDYGNQDWIQQESEEVVNRAELLFSEVLNGLSQIGEKRSNAVQISNGHKTPELRRQIAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDILEINRLWRQLIFQSYMWDHRLIYAANLANSSNGSGSSSPISEDKDKATDENQMSINSIHGDPKLNESPSLGGGTVVVDGKISQDDALHQESDMTKKENNEKDDRPISNSKSIIDQSDLLEPEFGVHRSLSDGPFPVIPSLSETLDAKWTGENRPGFGIQRDNSSINPDILTADALSTSVQKETYYLGDRLEDQNGSKSFYSSFKGHDNMEDSSSWLGMPFLNFYRQFNKNLFASTQKFDTLVDYNPVYMSSFRKQELQGGARLLLPVGVNETVITVYDDEPSSIIAYALMSPEYHFQLTDEGERPREGNEFASSYFSDSGTFQSFSSIDETAFDSQKSFGSIEEMIFSMSGSRSSSMFDPMSYNKALHARVSFGEDGPLGKVKYSVTCYSAKRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIATGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIAASNSQSDLGEDSTQSRTPAE 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02092 1824 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1650 1792 - -
Spst4g02092 1824 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 23 1806 - -
Spst4g02092 1824 MobiDBLite consensus disorder prediction 687 707 - -
Spst4g02092 1824 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1492 1648 - -
Spst4g02092 1824 Gene3D - 1650 1792 - -
Spst4g02092 1824 MobiDBLite consensus disorder prediction 1800 1824 - -
Spst4g02092 1824 MobiDBLite consensus disorder prediction 822 844 - -
Spst4g02092 1824 SUPERFAMILY GroEL apical domain-like 453 625 IPR027409 -
Spst4g02092 1824 SMART PIPK_2 1501 1792 IPR002498 GO:0016307|GO:0046488
Spst4g02092 1824 Pfam TCP-1/cpn60 chaperonin family 392 650 IPR002423 GO:0005524
Spst4g02092 1824 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Spst4g02092 1824 Gene3D GroEL 452 625 IPR027409 -
Spst4g02092 1824 SUPERFAMILY SAICAR synthase-like 1525 1791 - -
Spst4g02092 1824 SMART fyve_4 28 103 IPR000306 GO:0046872
Spst4g02092 1824 MobiDBLite consensus disorder prediction 1174 1261 - -
Spst4g02092 1824 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1566 1733 IPR002498 GO:0016307|GO:0046488
Spst4g02092 1824 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Spst4g02092 1824 CDD Fab1_TCP 388 659 - -
Spst4g02092 1824 MobiDBLite consensus disorder prediction 1229 1254 - -
Spst4g02092 1824 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 107 IPR013083 -
Spst4g02092 1824 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Spst4g02092 1824 MobiDBLite consensus disorder prediction 822 841 - -
Spst4g02092 1824 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1472 1648 IPR027484 -
Spst4g02092 1824 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1467 1791 IPR002498 GO:0016307|GO:0046488
Spst4g02092 1824 MobiDBLite consensus disorder prediction 1799 1824 - -
Spst4g02092 1824 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 452 625 - -
Spst4g02092 1824 CDD FYVE_PIKfyve_Fab1 32 99 - -
Spst4g02092 1824 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 108 - -
Spst4g02092 1824 Coils Coil 1104 1138 - -
Spst4g02092 1824 CDD PIPKc_PIKfyve 1528 1791 IPR044769 GO:0000285
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02092 Spst-Chr4 61726854 61735206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02092 2 1824 EF-hand Containing Proteins AT3G14270 60.108 0.0 2090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02092 K00921 - gmx:100819364 3243.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02092 4 61726854 61735206 Spst4g02092 4 61726854 61735206 ECH