Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02067 ATGTGGGCGTCTCCAACAATAAACCTTGATCTTAGGCTTTCAGCGGCAGATACTGTGGGCACCAGAAAGAGAAAAAGAGATGTTGATGTGTGTGGAATTCAGGTGGTGGCTGCGGGCGCTAAGTTCAATTTGAGAAGAGGCAATGGTTCTTCTCATAATTGTATCAATGGTTACAGCAGTGATGGAGAACTTTCCAGAATTAGTAAGAGTGGCTTTTTTTCATCATCAGTGACAGAGGTGGATAGAGACCCTTCTTGTGTTTCATTCACCACTTTCAACATTCTGGCTCCGATTTACAAACGGATTGATCCACAGAACCAAGGCCCACGAGAAAGTGACTGCAGATCATTCTGGTTGTCCAGAAATGAGAGTATTCTCGATTGCTTGCTTTCTGAATCATCTTCCATCATTTGCCTCCAGGAATTTTGGGTTGGAAATGAAGAGCTTGTTCACATGTATGAGGAGAGACTTGGAGATGCTGGCTACAATCTCTTCAAGCTTGGTCGAACCAACAATCGTGGAGATGGTCTGCTGACTGCTATACATAAAGAACGTCTAAGAGTTGTGGATTATCGAGAGTTGCTTTTCAACGATTGTGGCGATCGTGTTGCTCAGTTGCTACACGTTCAGTCAGTTGCCCCCTTTCAAAATCAAAAAGGCAGTGTTCCCCAAGAGTTTTTGATTGTGAACACCCACTTGTTATTTCCTCATGATTCAAGTCTTTGTGTTGTGAGATTGAATCAGGTGTACCAAATATTGAAATATGTAGAATTGTATCAGAGAGAAAACAGGCTCAAACCCATGCCTATTATACTCTGTGGCGACTGGAATGGCAGCAAGCGTGGGCATGTTTACAAGTTCCTTAGGTCACAGGGGTTTGTATCCTCATATGATATTGCTAATCAATACAGTGACAGTTATGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGAGGTAATATCTGTGGAGTTGACTTCATTTGGCTTTGCAATCCCAATCAAGCACGTAAACCTTTGAAGACCAGTTGGGCTGAAGCTGTATTTAGTATACTAAAATTCCAGTTGCGAAAAGCATCATTATCTGAAGATGATGCATTTGCCTTTCTAAAGGGTGACAACTATGCTGATTCTGTGACATATTTTAGTTTCTCCGAAGCTCTTCGTCAGGTAAAGTTAATTGGTGTGCCTTATGGACTATGCTTTCAACAATTACAAGATCTATGGAATCAAGCAGATATTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAGATTTGGAATTCTGCATGTCCAGAGCATGTGCTGGAAAATTTGAATGGGTGCATGGAAGATGGTAACGCAGAATTGGAGCAGCAAGAAGCTATTGGATTTCATATAAAGAATGCAATGCTGTATCCGCGTGAAGTGGAGAAAGGACTATGGCCAGAAGATTATTCCCTCTCTGATCATGCTAGACTCACAGCTGTGTTTTCACCAGCTAGGATGAGATGTTCTGGCACACAAAACTGA 1524 0.4193 MWASPTINLDLRLSAADTVGTRKRKRDVDVCGIQVVAAGAKFNLRRGNGSSHNCINGYSSDGELSRISKSGFFSSSVTEVDRDPSCVSFTTFNILAPIYKRIDPQNQGPRESDCRSFWLSRNESILDCLLSESSSIICLQEFWVGNEELVHMYEERLGDAGYNLFKLGRTNNRGDGLLTAIHKERLRVVDYRELLFNDCGDRVAQLLHVQSVAPFQNQKGSVPQEFLIVNTHLLFPHDSSLCVVRLNQVYQILKYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYSDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASLSEDDAFAFLKGDNYADSVTYFSFSEALRQVKLIGVPYGLCFQQLQDLWNQADIDGNGVIDFEEFKQKIWNSACPEHVLENLNGCMEDGNAELEQQEAIGFHIKNAMLYPREVEKGLWPEDYSLSDHARLTAVFSPARMRCSGTQN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02067 507 Gene3D Endonuclease/exonuclease/phosphatase 65 364 IPR036691 -
Spst4g02067 507 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 71 495 - -
Spst4g02067 507 Pfam Endonuclease/Exonuclease/phosphatase family 125 300 IPR005135 GO:0003824
Spst4g02067 507 FunFam Putative calcium-binding protein 70 499 - -
Spst4g02067 507 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Spst4g02067 507 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Spst4g02067 507 SUPERFAMILY DNase I-like 80 301 IPR036691 -
Spst4g02067 507 SUPERFAMILY EF-hand 383 431 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02067 Spst-Chr4 61487019 61490510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02067 152 503 EF-hand Containing Proteins AT1G02270 63.611 2.06e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02067 - - gmx:100788191 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02067 4 61487019 61490510 Spst4g02067 4 61487019 61490510 ECH