Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02029 ATGAGGATGTTTCATAAAGCCTTCACTTCAACTCTTGTCTTTCTTTTCTTCTCTGAGGTAGTGTTCTCTACTCCTCCAGAGGATCCAATACAGTGTTCTTCAGGGAACACAACCTGCACCATCACAAACTCCTATGGCATGTTCCCCGACCGAAGCATCTGCCTTGCCTCTCAAGTGTTGTACCCCACCACTGAGCAAGAGCTTGTGTCAATGGTTGCATCAGCAGCCAGAAGCAAAAGCAAGATGAAAGTTACCACTCGTTTTTCCCACAGCATTCCCAAGCTGGTGTGCCCAGAAGGTCAAAATGGGGTGCTGATAAGCACAAAATACCTCAACAAGGTAGTGAAGGTTGACGTGGCAGCAAGGACAATGAGAGTGGAGAGTGGTGTGACATTGAAGGATCTCATCAGTGAGGCTGCAAAGGCAGGGTTGGCCTTGCCATATGCACCATATTGGTGGGGTTTGACCATTGGGGGGCTTTTGGGAAGTGGTGCACATGGCAGCACTTTGTGGGGAAAGGGAAGTTCTGTTCATGACTATGTGGTGGACCTTAGGATTGTTAGGCCTGCTAGTCCTCAAGAAGGTTATGCTAAGGTTGAGAGCCTCAATGAACAACATGAAGAACTCAATGCTGCCAAAGTGTCACTTGGGGTGCTTGGAGTTATTTCACAGGTTACTCTAAAACTAGAAGCTATCTTCAAGCGATCCATCACGTATGTGGCAAAAGATGATTCAGATTTGGGAGAACAAGTGGCTAGTTTTGGACATGCACATGAGTTTGCGGATATAACGTGGTACCCAAGTCAACACAAAGCTGTGTACCGTGTTGATGATCGTGTCCCAAATAACACATCGGGCAATGGTCTTTACGACTTTATCCCTTTCCGTCCCGTTGCTTCACTTACATTGGCAGTCGTAAGAACCTCAGAGGATATTCAAGAAATCGTTGGTGATGCCAATGGGAAGTGCCTAAGTGCTAAGACCACAACGAATACCCTCGTCACCTCTGCTTATGGACTAACTAACAATGGTGTAATCTTCACTGGATACCCTGTAATTGGATTTCAGAACCGGCTTCAGGCATCTGGGACATGCTTGGATAGTCTTCAAGATGCAAAGATCACAGCATGTGCATGGGATTCGAGGGTGAAGGGAGAGTTTTTTCACCAAACCACATTTAGCATTGGTTTGCCAGTTGTAAAAAATTTCATTGAAGATGTGCAAAAGCTGGTTCAATTGGAGCCAAAGGGGTTGTGTGGCATAGAGCTTTACAACGGATTTCTCATGCGTTATGTCAAGGCTTCAAGTGCCTACTTGGGGAAACAAGAGGATGCTTTAGACATTGATATCACATACTACCGTAACAAGGACCCGATGACTCCAAGGCTCTATGAAGACATTCTTGAAGAGGTTGAGCAACTTGGGATTTTCAAATATGGAGGGCTACCTCATTGGGGTAAGAATAGGAACTTGGCGTTTGAAGGAGCCATCAAGAAGTACAAAAATGCTGAGAAATTTCTGAGGGTTAAAGAGAAGTACGACTCAGAAGGGCTTTTCTCAAGTACGTGGACAGACCAAATTCTTGGGCTAAAGGATGGGGTGACAATACTGAAGGATGGATGTGCATTAGAAGGCTTGTGCATTTGCTCACAGGATAGTCATTGCAATCCAAGCAAAGGCTACTATTGCAGACCAGGCAAAGTTTACAAGGAAGCAAGGGTTTGTACTCATTGGAGATCCAAATGA 1746 0.453 MRMFHKAFTSTLVFLFFSEVVFSTPPEDPIQCSSGNTTCTITNSYGMFPDRSICLASQVLYPTTEQELVSMVASAARSKSKMKVTTRFSHSIPKLVCPEGQNGVLISTKYLNKVVKVDVAARTMRVESGVTLKDLISEAAKAGLALPYAPYWWGLTIGGLLGSGAHGSTLWGKGSSVHDYVVDLRIVRPASPQEGYAKVESLNEQHEELNAAKVSLGVLGVISQVTLKLEAIFKRSITYVAKDDSDLGEQVASFGHAHEFADITWYPSQHKAVYRVDDRVPNNTSGNGLYDFIPFRPVASLTLAVVRTSEDIQEIVGDANGKCLSAKTTTNTLVTSAYGLTNNGVIFTGYPVIGFQNRLQASGTCLDSLQDAKITACAWDSRVKGEFFHQTTFSIGLPVVKNFIEDVQKLVQLEPKGLCGIELYNGFLMRYVKASSAYLGKQEDALDIDITYYRNKDPMTPRLYEDILEEVEQLGIFKYGGLPHWGKNRNLAFEGAIKKYKNAEKFLRVKEKYDSEGLFSSTWTDQILGLKDGVTILKDGCALEGLCICSQDSHCNPSKGYYCRPGKVYKEARVCTHWRSK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02029 581 Gene3D - 390 490 - -
Spst4g02029 581 FunFam L-gulonolactone oxidase 5 113 231 - -
Spst4g02029 581 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 232 IPR016166 GO:0071949
Spst4g02029 581 Pfam D-arabinono-1,4-lactone oxidase 427 526 IPR007173 GO:0003885|GO:0016020
Spst4g02029 581 Gene3D - 113 230 IPR016169 -
Spst4g02029 581 NCBIfam FAD-dependent oxidoreductase 25 576 IPR010030 -
Spst4g02029 581 SUPERFAMILY FAD-binding/transporter-associated domain-like 50 230 IPR036318 GO:0050660
Spst4g02029 581 Pfam FAD binding domain 57 189 IPR006094 GO:0050660
Spst4g02029 581 PANTHER GULONOLACTONE OXIDASE 23 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02029 Spst-Chr4 61064952 61069146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02029 K00103 - gmx:100790483 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02029 4 61064952 61069146 Spst4g02029 4 61064952 61069146 ECH