Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01990 ATGGGGAGCGTGGCGTGGAAGCAGCTTCTTCTGAACGCTTTGGAATCCAACGCTCACCTCAAGCACTCTACTTTCATGCAACTCGCAACCATAGGAACCAACGGAACACCTTCGAACCGCACTGTCGTTTTCAGAGGATTCCAAGATAATACCGATAACATCCAAATTAACACTGATGCTCGCACTCGCAAGATTGAAGAGCTCAAGCTTTGCTCCTCTGCTGAGATATGTTGGTATTTCACAGATTCCTGGGAGCAATTTCGGATAAATGGAAATGTAGATATCATTGATGGTTCGAATACTGACCCGCTCAAACTTCAGCAAAGAGAAAATTCTTGGTTTGCCAGTTCATTGAGATCAAGGTCGCAATATTTGTGCCCCAACCCTGGACTTCCCTGTCTATATGAGCAAGCTCAGCCCGAATTATCATTAGATCCTTCTACAGGTCCAATTGATGCTTTTTGCCTTCTGATCGTAGAACCAGATCAGGTTGATTACTTGAATCTGAAGAGTAACCAGAGGCTAACATTCAAATCAAGTGTGAGTGCTGCAGCAAAGAAAAGCTGGACTGTGGAGAGGGTCAACCCATAA 591 0.4467 MGSVAWKQLLLNALESNAHLKHSTFMQLATIGTNGTPSNRTVVFRGFQDNTDNIQINTDARTRKIEELKLCSSAEICWYFTDSWEQFRINGNVDIIDGSNTDPLKLQQRENSWFASSLRSRSQYLCPNPGLPCLYEQAQPELSLDPSTGPIDAFCLLIVEPDQVDYLNLKSNQRLTFKSSVSAAAKKSWTVERVNP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01990 196 Pfam Pyridoxamine 5'-phosphate oxidase 5 96 IPR024624 GO:0010181
Spst4g01990 196 SUPERFAMILY FMN-binding split barrel 5 196 - -
Spst4g01990 196 NCBIfam PPOX class probable FMN-dependent enzyme, alr4036 family 5 196 IPR024015 -
Spst4g01990 196 Gene3D - 3 196 IPR012349 -
Spst4g01990 196 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 5 196 IPR000659 GO:0004733|GO:0008615|GO:0010181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01990 K00275 - gmx:100779815 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01990 4 60577277 60579299 Spst4g01990 4 60577277 60579299 ECH