Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01963 ATGTTGACGATGATCATCGTTGCGCTCATCACTGTCATAGTTGTCGGATTCTGCATTGCTCCAATCAACGGCAGATGGCGGAGGAAGACAGCCGTCGGGTTCTTCCATCCGTACACCAACGACGGCGGTGGCGGGGAGAGGGTGCTGTGGTGCGCCGTCAAAGGCATCCAAGAGGAGAGCCCTGACCTTGACTGCTATGTCTACACCGGAGATCATGACGCGACCCCTCAATCGCTGATGTTTCGAGCCCTCGATCGCTTTGGAGTCACGCTCCTTTCTCCTCCCAAGGTGGTTCATTTGTACAAGAGAAGGTGGATTGAAGAAACCACTTATCCGCACTTTACAATGATTGGTCAAAGTCTGGGTTCTATGTATCTTGTATGGGAGGCTTTGTGCAAGTTTACACCTTTATTTTACTTTGACACAAGTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGATGCAAAGTTATTTGCTATACACATTATCCTACTATCAGTTCAGACATGCTAGCTCGTGTTCGTCATCGCAGCTTGATGTATAATAATGATGCCCTAATTACAAAAAGTGTTTGGCTTTCAAGGTGCAAAATAGTCTATTATGCAATATTCAGTTGCTTGTATGGGATTGTAGGATCATGTGCGCACCTAGCTATGGTTAATTCATCTTGGACCAAATCCCATATTGAAAATCTTTGGAGAGTACCAGATCGGATTAAGCGAGTCTATCCTCCTTGTGATACTTCAGGACTCCAAGTACTTCCCTTGGGACGATCAGCAGACATTCCTGTAATAATATCTGTTGCACAATTTCGCCCGGAGAAGGCTCACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTGGATCCTACCCTGCCAAAACCTAAGTTCCAAATTGTGGGTAGTTGTAGAAACAAGTCAGATGAAGACAGACTTCAAATGTTGAAGAAGAGAGCTATTGAGCTGAATATTAACGAACATGTGGAATTTCACAAGAATGTAACATACAGAGATTTGGTGGAACTTTTAGGCGGTGCTGTTGCTGGCATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTTGTAGAATACATGGCTGCCGGTGCTATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTGTTGGATGAAGATGGACAGCAAACAGGCTTTCTCGCTTGTACTGTTGAAGAATATGCAGACGCCATAGTACGAATCGTAACAATGACAGAGAAAGAAAGACTTTTGATGGCTGCAGCTGCAAGAAGAAGGGCAAGGAGATTTTCTGAGCAGAGGTTTTACGATGACTTCAAAGCTGCAGTGGGACCTATCTTATGTCATATTTCTAGGTGA 1380 0.4428 MLTMIIVALITVIVVGFCIAPINGRWRRKTAVGFFHPYTNDGGGGERVLWCAVKGIQEESPDLDCYVYTGDHDATPQSLMFRALDRFGVTLLSPPKVVHLYKRRWIEETTYPHFTMIGQSLGSMYLVWEALCKFTPLFYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRHRSLMYNNDALITKSVWLSRCKIVYYAIFSCLYGIVGSCAHLAMVNSSWTKSHIENLWRVPDRIKRVYPPCDTSGLQVLPLGRSADIPVIISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDEDRLQMLKKRAIELNINEHVEFHKNVTYRDLVELLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAIVRIVTMTEKERLLMAAAARRRARRFSEQRFYDDFKAAVGPILCHISR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01963 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 34 448 - -
Spst4g01963 459 Coils Coil 310 330 - -
Spst4g01963 459 Gene3D Glycogen Phosphorylase B; 257 437 - -
Spst4g01963 459 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 25 455 IPR038013 GO:0004377
Spst4g01963 459 Pfam Glycosyl transferases group 1 265 429 IPR001296 GO:0016757
Spst4g01963 459 FunFam GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase 256 437 - -
Spst4g01963 459 CDD GT4_ALG11-like 31 445 IPR038013 GO:0004377
Spst4g01963 459 Pfam ALG11 mannosyltransferase N-terminus 30 235 IPR031814 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01963 217 442 Glycosyltransferase AT1G78800 25.751 6.98e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01963 K03844 - gmx:100808662 854.744