Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01957 ATGGGTGAACATGAAGGGTGGGCACAGCCACCTAGTGGGCTATTACCAAATGGTTTGTTGCCCAATGAAGCTGCCTCCGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAAGCTGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCTCCCCTCTGAAGAGCGCCGGAATGCAGTTGCCGACTATGTCCAACGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGTTCGGTTCCCCTTAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGAGACATGGGCACATCAGGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCCGAGTTTCATGTTAAGGAGGTTCAATACATACAGGCTGAAGTGAAAATTATAAAGTGTCTTGTGGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTCGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGCATTATCCTGATAAAAGCTTGGTGTTACTATGAAAGCCGCATACTTGGTGCTCACCATGGGCTTATCTCAACTTATGCCTTAGAAACCTTGGTTCTTTATATATTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTGTTGTATCGATTTTTGGAATTTTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTATGGGGTCCAGTACCTATTAGTTCACTCCCAGATGTGACAGCCGAACCTCCTCGAAAGGATAGTGGAGATTTACTGCTTAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGTCAAGAAAATCAGGGGCAACCGTTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGGGTCAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTGGCTAGGTTACTTGATTGCCCAGAGGAAGAATTGTTTTCTGAGGTGAATCAGTTCTTTTTTAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATTGACTTACAGCGTTTGAGTTTATCCAGTCATGACCAATTACAGAGGTCGGAGAATCTCCGGATCAATAACCATAAAATTGATAATGCCTCCAATCATGAATCTAATGAAGGGGAACATGTTTCACAGAGTGTTATATCTCAGTATAGTAATTTATTATCTCAAAAGACATCTAGAAGTGTTGTTTCTATTGTGTCACATACTCAGAATCAAAAGAGTTATGGAAGCCAAAATAATTCAAGGACCTTTGATCATGTTCAGAGGGAAACTAATTCTAATCAAGGTGTTCATTTTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACCTAGTGAGTGATGTTCAGGGAAGGTTTCTGTTTGCCAGGACACGTTCTAGCCCTGAGCTGACAGACTCATATGGTGATGTTTCAATCCAAGGGAGACGTGCAAAAGCAACAGAAACTAGTAAAGGCCAGGCTTCCTCCGCGAAGTTGGAGAATAGTAGAAGGAAGAATGTTGAACCTGATGTAGCTGTAAGAATGGATGAGTCATCTGCGAGGCACATCTCATCTCGTAAAGTTCTTGACAATGCTACTGATTCAAACAGTAATCATGATGAATCAAGCTCAGGTATCATGGGTGAAGAGTTTGCATCTGTTTCTGGTGCAGGTGGAATGCATATGATGCATCAGGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCACAGCTCAGGGTTTCAGTGGTCAGACTCATGTTCCAATGAATATTACGCCTGGCCACCTACCATTTCCTTTTCCACCTTCTATTCTTGCATCAATGGGATATACTCAGAGAAACATGGGTAACATTCCCTTTATCGAGTCTCCTTGGGGTACAAATATGCAATTTCCTCAAGGTTTCATCCCACCATTGACTCCATATTTCCCTGGCATAGGAATGACCTCTAGTCCTCAAGAATTACTTGAAACTAACAATGAGAGTTTCAATTCTGTTGAGGCTACCATAGGAGAAGCTGATAATGATTACTGGCATGAACAGGAAAGGGGTTCTGCAAGTGAGGTTGAAATTGATAATGGAAATTTTGAAATGCTCCCAGAGGATAGGCAACAGTCTACCTCAGGTAGTTATAACTCTGCCCTGTTATCTCGGGTAGGCAGCTCCAACAGCAACAGTTCTGCTGGAGTTCAGCAGAAGTTTGCTAAAGAAAACCTAGGTTTGACCAGAGAAGAGCATATTGACAATTTTCATTTTCAAGATGGCCGAAGAAATGAGGTTTATTTTGATGATAGAACAGCAATTTCAGAGTTATCCAGCGCACCTCCTTCAAGCTCCTTCAGGAGTAGGACCCCTTCTGAAAGCTCTTGGGATGGATCATCAGTGAAATCCTCAAAATCAACAAGGGAGAGAAGGGGGAGGAAAAATACTCCCTCAATGCCATCTCAAAATCCTGTGTATGGGAAGGGTAAGAATGTTTCAGAAATTTCATCTAACCGAGTAGATGATGAAAACAAAGATTGGACTGCTTTGTCGACCATGGCATCTGATATGTCAGAAAGAAACACTTGGACCGCATCTGGTACTTCCTTGCATGCTCCAAGGAATCAAATATCTAGTTTTGAAACTGCTCAAACTAGTGGATCAGATTCTCCATTACCCATCCCCCCAGTGCTTATAGGTCCTGGTTCTCGCCAAAGAGCAGCTGATAATTCTGGGGTTCTTCCATTTACATTCTATCCTACTGGACCACCTGTTCCCTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCAACAAACAACTTCAATGCCGAAGAAGGGGCAGATAACAGTGATTCAAGTCCAAATTTTGATTCATCCGAGGGATATGAACACCCTGAGGTGTCAAGTCCTTCCAATTCAATGACGAGGGTGGCTATTGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGTCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACTCACGTCAACCACCTTCAATGATCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCATGGGATGGTCCTGGAAGACCTATATCCGGTAACATGAATATTTTTAGTCAGCTTATGAGCTATGGGCCACGTCTGGTTCCTGTTACTCCTCTCCAATCAGTTTCTAATAGACCTACCAATTTTTACCAACGTTATGTAGATGATATGCCACGGTATAGAAGTGGAACTGGAACCTACTTGCCAAATCCGAAGGTGTCTGCTCGGGATCGACATTCCACAAATACCAGAAGGGGAAGTTACAATTATGATAGAAGTGACCATCATGGTGATAGAGAAGGGAATTGGAATACTAACTCAAAATTGCGAGGAACTGGTCGAAGCCATAATCGCAACCAGACGGAGAAGTCCAACTCAAAACCAGAGAGGTTGTCTACCAGTGAGAGCCGTGCTGAGAGACCATGGGGTTCACACAGGCATGACACCTTCATTCCTCACCAGAATGGTCCAGTCCGCTCAAATTCCTCACAGAGTAATTCTTCCAGTGTAACTTATGGAATGTATCCTATACCGGCCATGAACCCTAGTGGAGTCTCATCAAATGGTCCAATGCAATCTGTTGTAATGTTTTATCCTTTTGATCATAATTCCGGATACGGGTCACCTGCGGAGCAGCTTGAGTTTGGGACTCTGGGACCAATGGGGTTTTCAGGTGTCAATGAACTGTCACAGGCAAACGAGGGAAGTCAATCTAGTGGAGCACATGAAGAGCAAAGGTTTCGTGGTGGTCACACCCAACGATCTTCACCAGATCAACCGTCCTCACCTCATGTTTCAAGGTAG 4008 0.4296 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNLPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKETWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDSGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEEELFSEVNQFFFNTWDRHGSGERPDVPSIDLQRLSLSSHDQLQRSENLRINNHKIDNASNHESNEGEHVSQSVISQYSNLLSQKTSRSVVSIVSHTQNQKSYGSQNNSRTFDHVQRETNSNQGVHFDKGQRNVKADNLVSDVQGRFLFARTRSSPELTDSYGDVSIQGRRAKATETSKGQASSAKLENSRRKNVEPDVAVRMDESSARHISSRKVLDNATDSNSNHDESSSGIMGEEFASVSGAGGMHMMHQEEQDLLNMMASPTAQGFSGQTHVPMNITPGHLPFPFPPSILASMGYTQRNMGNIPFIESPWGTNMQFPQGFIPPLTPYFPGIGMTSSPQELLETNNESFNSVEATIGEADNDYWHEQERGSASEVEIDNGNFEMLPEDRQQSTSGSYNSALLSRVGSSNSNSSAGVQQKFAKENLGLTREEHIDNFHFQDGRRNEVYFDDRTAISELSSAPPSSSFRSRTPSESSWDGSSVKSSKSTRERRGRKNTPSMPSQNPVYGKGKNVSEISSNRVDDENKDWTALSTMASDMSERNTWTASGTSLHAPRNQISSFETAQTSGSDSPLPIPPVLIGPGSRQRAADNSGVLPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTNNFNAEEGADNSDSSPNFDSSEGYEHPEVSSPSNSMTRVAIESSEHKPDILNSDFVSHWQNLQYGRFCQNSRQPPSMIYPSPVMVPPVYLQGRYPWDGPGRPISGNMNIFSQLMSYGPRLVPVTPLQSVSNRPTNFYQRYVDDMPRYRSGTGTYLPNPKVSARDRHSTNTRRGSYNYDRSDHHGDREGNWNTNSKLRGTGRSHNRNQTEKSNSKPERLSTSESRAERPWGSHRHDTFIPHQNGPVRSNSSQSNSSSVTYGMYPIPAMNPSGVSSNGPMQSVVMFYPFDHNSGYGSPAEQLEFGTLGPMGFSGVNELSQANEGSQSSGAHEEQRFRGGHTQRSSPDQPSSPHVSR 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1292 1311 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1222 1237 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 570 585 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 812 882 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 524 541 - -
Spst4g01957 1335 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Spst4g01957 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Spst4g01957 1335 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1145 1171 - -
Spst4g01957 1335 Gene3D - 162 361 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1289 1335 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 742 772 - -
Spst4g01957 1335 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1333 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 511 588 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 975 1022 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 852 870 - -
Spst4g01957 1335 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1320 1335 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1183 1215 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 1128 1237 - -
Spst4g01957 1335 CDD NT_PAP_TUTase 59 166 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 542 569 - -
Spst4g01957 1335 MobiDBLite consensus disorder prediction 812 838 - -
Spst4g01957 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01957 Spst-Chr4 60212441 60219101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01957 - - gmx:100809742 2379.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01957 4 60212441 60219101 Spst4g01957 4 60212441 60219101 ECH