Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01944 ATGATAATGGTGATGAACTCACCAACACTGAAGGGAGAAGAGTGTGAGAAAGAAGAAGAAAAAGCAATGGCAATATGGGATTGTGGTAGTCCATTGTATGATTCTTATGAATTGGCATCTCTTGATCATATCATTGATCGACATCTGATGACATTTCCTTCTTCCATTGGATCATCAAAGCACATCATCACCAGATTCACTACTCATCACTCTCATGATCATGATATGGTGCCACACGAACTTGGTTCTCCAGGGAAATCCAAAGGGTCTTTCATGAAGCCAAACACTTCCTTTTGGACTCTACGTGAAAGTTCTATCGTAATAATATCTGAGGATTGTGCTGCTTCTTCTTCTTTGTTTGGTTATGGTGCTTGGTTAGAGGCCCTTTGTGTGTTTGTGTATTATCTCTTAGCTTCAGCAATGGGGGACTCAGCTAACTTGCGTTTGGTGAGGTGCCCCAAGTGTCAAAATGTTCTTCCCGAGCTTGCCAATTACACTGTGTATCAATGTGGTGGTTGTGATACTGTTCTTCGAGGAAAGCTTAAAAGTTCTGAAGGTAGTAGGTTGTGGGAAGCGTCAGATGAGCAAGGTGGAGGGGATCATGCTAAATCAGAAAGTGTTTTGGGTAAAGGGGTAGTTGATTTGATTGATAATTCAGATGTTGATATTAGGTCCAATGGTGGTTTCTCAACGGAGGGTCGAAGAAGGGATTTGGGGAAACCAAATAAAGGACATGAGAAGTTTTTGGATGATTCCAAGGATGGGGATGAGAAAGGGGTTTGGGAGAATGGTTTTGCCAATAAGAAGGACAAAGGGGGTAAGTCAATTGGAAGAGAGCAGCAGGAGCAGAAGTCTCACATGGGAGGGGACCAATTCTATGGGAGAGTGTCTAATTGGCCTTATTGGGAGAGTGGAGAGATGGAGGGGTTTCGGAGAAAGCCTCAAGCTGATATGGAGGGTGTCAGATTTCCCACTTTTAGTTATCCTGATGAGGGATCTTCAAATAGCTATTCCAGTTTTTCTTACAATTATGGGGAACAGTGGAGGAATTTCAAGGACATGGATGGTGTGAATAGGGTTCAGCATCTTGAGCAAGATCGAGCCGATATTCTAAGGAAGCTGGATGAGTTAACCAACCAATTGAACAAGTCTTCTGAGGTGGTTAGTAACCCCAAAGAAAAGGTTCTTGCTGATGCAAAAATGGTTCCTCCAGATCCTTACAGTGGTCCTGAAACTTGGTTTCCAGATGGATATGGATCATCGGGTATGAACAGGACCTCAAGACAATTCTTTGGCCCTAATAAACAAATGGCAGGCCCCCCTTATTTCAATTATCATCTTGATCCATATGCTTATCCGGCAGGTCCTGAAATGGCTATGCGCAACTTTCACCCTTCCATGCATAATCCAAATTATGTTCCTGGATATGGGGATCCTTTTGTAGCCCCAATGATGAGAGATTCACATCCTTTACCCCACCAGTTCCCACAAAAACCAATGCATCCCTACTTTCCTGGGCGCTATCCTGATACTGGTCCAGATTCATATGATCCATATGTACATAGTGCTATGCTTCACCCACATTCTTGCTCTTGTTTTCATTGCTATGACAAGAAAAGAAGAGGTTCAGTGCCAGTGCCATCTGCTGCATTTGTTAACAGCAGATTGCCTCATAACCCAAATGATCCTATGCTGTACCGCCATGAGATTCCAGGGGCGGTTGGTCCTCATGTTCATAATTCTAGAGCTGCCATTCCTGCCACGAGTTTACATGAAAGACAACTACGTACAAGATGGCCTAGAGACTACAATTCTGAGATGGGTGGATTTCTTGGAAGGCATCCTCCAAAAGTAGGGCCTGTGAGTGGTACTCGGCAATGCCTTCCTATAGCTGGTGGTTCTCCTTTCATCACATGTCATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAGATCATGGTTAAGAATCGTAAGCAGAAAATGCGATGTGGAGCTTGTTCTTCAGAAATAAAATTTGCTGTCATCAATAAGAAGCTAGTAATTTCTCCTCATTCTGAAATGGAGAAAACTACCACATCCACAAGGATTGAAGATGCCACTAGTGAGGTTGTGAATAGACGTGTATTCCATTCCCGTGGTGATGTGGACGCGAAAGCTGCAAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCAGTTGATAGAGAATCTTCTGCGCTGGCTGCAGACTCAACCTTGAAGGCGAGAGAGACGCAAAGTTTCCACTCTTCATCTCCCAGTATTTCTGATGATGAAAATAGTCCAGAAATTATGACTGTACCAAGTGAAGCTACCAAGTCCATTCATCAGCCATCTAAAGCCTCTCTATCTCCTCCACCTGGTGGTTCATTAAGTAACCATGCGGTAAATCGATCAGGGAAAGGAAACCAAAGTGGTCGCTCAGATCAAGAGATGGAAAAGATAGAAAAGAATGCCTCAAGGCAAAATTCTTTGAAAGAGGTAGTGCTTGCAACTGAGATGGATGTCATTGATTATTCTAACACTGGGGTTTCTCAGGATTCTGGTGATGCAAGCAGAGAACATGATCTTCCCAGATCTAACAAAAGGGTCGATTCATTATTTGAAAACATTATTAAGAAAGATAATGTCAAATGTAATGTTACTGTAAACGGACAGCCATTACCAGAACGAGTGATTAAAAAGGCTGAAAAGCTCGCTGGAACAATCCAGCCAGGAAATTACTGGTATGATTCTCAGGCTGGATTTTGGGGTGTCATGGGTGGACCATGTCTTGGAATAATTTTGCCATTCATAGAAGAGTTCCAGTTTCCCATGCCAGAAAAATGTGCTGGTGGAAATACTGGTATTTTTGTAAATGGTAGGGAACTTCACCAAAAAGATTTAGATTTGCTTTCTCGTAGAGGACTTCCTCGCGATAGCAATAGGTCTTATATAGTTGAAATTTCTGGGAGGATTCGGGATGAAGACACAGGAGAAGAGCTGGACAGCCTTGGTAAACTTGCACCAACAGTGGAGAAAGAAAGGCGTGGATTTGGCATGAAAGCACCAAGAGCAGCTGCATAA 3090 0.4278 MIMVMNSPTLKGEECEKEEEKAMAIWDCGSPLYDSYELASLDHIIDRHLMTFPSSIGSSKHIITRFTTHHSHDHDMVPHELGSPGKSKGSFMKPNTSFWTLRESSIVIISEDCAASSSLFGYGAWLEALCVFVYYLLASAMGDSANLRLVRCPKCQNVLPELANYTVYQCGGCDTVLRGKLKSSEGSRLWEASDEQGGGDHAKSESVLGKGVVDLIDNSDVDIRSNGGFSTEGRRRDLGKPNKGHEKFLDDSKDGDEKGVWENGFANKKDKGGKSIGREQQEQKSHMGGDQFYGRVSNWPYWESGEMEGFRRKPQADMEGVRFPTFSYPDEGSSNSYSSFSYNYGEQWRNFKDMDGVNRVQHLEQDRADILRKLDELTNQLNKSSEVVSNPKEKVLADAKMVPPDPYSGPETWFPDGYGSSGMNRTSRQFFGPNKQMAGPPYFNYHLDPYAYPAGPEMAMRNFHPSMHNPNYVPGYGDPFVAPMMRDSHPLPHQFPQKPMHPYFPGRYPDTGPDSYDPYVHSAMLHPHSCSCFHCYDKKRRGSVPVPSAAFVNSRLPHNPNDPMLYRHEIPGAVGPHVHNSRAAIPATSLHERQLRTRWPRDYNSEMGGFLGRHPPKVGPVSGTRQCLPIAGGSPFITCHNCFELLQLPKKIMVKNRKQKMRCGACSSEIKFAVINKKLVISPHSEMEKTTTSTRIEDATSEVVNRRVFHSRGDVDAKAANFSSDDYSGYDFHSVDRESSALAADSTLKARETQSFHSSSPSISDDENSPEIMTVPSEATKSIHQPSKASLSPPPGGSLSNHAVNRSGKGNQSGRSDQEMEKIEKNASRQNSLKEVVLATEMDVIDYSNTGVSQDSGDASREHDLPRSNKRVDSLFENIIKKDNVKCNVTVNGQPLPERVIKKAEKLAGTIQPGNYWYDSQAGFWGVMGGPCLGIILPFIEEFQFPMPEKCAGGNTGIFVNGRELHQKDLDLLSRRGLPRDSNRSYIVEISGRIRDEDTGEELDSLGKLAPTVEKERRGFGMKAPRAAA 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01944 1029 Coils Coil 360 387 - -
Spst4g01944 1029 MobiDBLite consensus disorder prediction 229 285 - -
Spst4g01944 1029 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 142 1021 IPR040244 GO:1900150
Spst4g01944 1029 MobiDBLite consensus disorder prediction 815 829 - -
Spst4g01944 1029 MobiDBLite consensus disorder prediction 849 868 - -
Spst4g01944 1029 MobiDBLite consensus disorder prediction 746 814 - -
Spst4g01944 1029 MobiDBLite consensus disorder prediction 745 831 - -
Spst4g01944 1029 Pfam Probable zinc-ribbon domain 631 674 IPR021480 -
Spst4g01944 1029 MobiDBLite consensus disorder prediction 226 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01944 Spst-Chr4 60102861 60114362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01944 - - gmx:100798240 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01944 4 60102861 60114362 Spst4g01944 4 60102861 60114362 ECH