Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01931 ATGCCGACGGGGCTGCCGGCGGCGAACTCCTCCGTCGTGACAGACGACGAGGGCTGGGTGTGGGCGCAGATCAAGGCGGAGGCGCGCCGCGACGCGGAGTCGGAGCCGGCGCTTGCGAGTTACCTCTACTCGACGATCCTTTCGCACTCCTCTCTCGAACGTTCTCTGTCGTTCCACCTTGGGAACAAGCTCTGTTCTTCTACGCTCCTCTCCACTCTCCTTTACGACCTCTTCCTCAACGCCTTCTCCTCTGACCCCTCCCTCCGCTCCGCCGCCGTTGCCGACCTCCGCGCTGCCCGCGAACGCGACCCCGCCTGCGTCTCGTACTCTCACTGCCTCCTCAATTACAAAGGCTTCCTCGCCTGCCAGGCGCACCGAGTGGCACATCTGTTGTGGCGGCAATCACGGCGGCCGTTGGCATTGGCACTGCACTCTCGCATTGCTGATGTGTTTGCGGTGGACATTCACCCGGCGGCGAGGATTGGGAAGGGGATTCTGTTTGATCATGCCACTGGGGTGGTGGTGGGGGAGACAGCGGTGATTGGGAACAATGTCTCGATTCTTCATCATGTTACGCTGGGTGGCACTGGCAAGGTTGGTGGTGACCGGCATCCCAAGATTGGGGATGGAGTGCTTATAGGTGCTGGTGCTACAATTCTGGGAAACATTATGATTGGGGAAGGTGCGAAGGTTGGTGCTGGGTCGGTGGTTTTGATTGACGTGCCACCGCGGACGACTGCAGTTGGGAACCCAGCGAGGTTGGTTGGTGGGAAGGAGAAGCCCTCTAGGCATGAGGATGTGCCTGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCAGATTATATCATTTAA 861 0.5912 MPTGLPAANSSVVTDDEGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDPSLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIMIGEGAKVGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSRHEDVPGESMDHTSFISEWSDYII 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01931 286 NCBIfam serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
Spst4g01931 286 CDD LbH_SAT 151 251 IPR045304 -
Spst4g01931 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Spst4g01931 286 Pfam Hexapeptide repeat of succinyl-transferase 171 187 IPR001451 -
Spst4g01931 286 MobiDBLite consensus disorder prediction 257 271 - -
Spst4g01931 286 MobiDBLite consensus disorder prediction 252 273 - -
Spst4g01931 286 SUPERFAMILY Trimeric LpxA-like enzymes 16 256 IPR011004 -
Spst4g01931 286 Gene3D Hexapeptide repeat proteins 154 274 - -
Spst4g01931 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Spst4g01931 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Spst4g01931 286 FunFam Serine acetyltransferase 5 5 153 - -
Spst4g01931 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
Spst4g01931 286 PANTHER SERINE ACETYLTRANSFERASE 9 286 - -
Spst4g01931 286 FunFam Serine acetyltransferase 154 279 - -
Spst4g01931 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01931 Spst-Chr4 59960889 59962302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01931 20 274 Miscellaneous Gene Families AT2G17640 56.863 2.89e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01931 K00640 - gmx:547632 552.747