Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01928 ATGAAGGCTCTAAGACTTCTCTTCATGATGACTTATCTAGGTTCATTCTTCCTTGCAAGCCCAGAAGCAGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCTATCCCCTTTGATACAACCAACCTGCACTGCCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGCTCAGACTTCTGTCAACATTTGGAGCTTCATTCTCTCAACCCCAGACGCAAATTCTTACATAGCTATGGGATTCTCTGTCACTGGCGGCATGGTTGGTTCGAGTGCCATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACTCCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTTATAGCTAATTCAACCTTCATCACTTTGCAGTCCTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCACTGAACCTTTGTCCTCTCTGATATTTGCCACTGGATCCACCGGTTTATTCCCTGGACCACCGAGCTTTGTACTAACAAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGCCAACATTGGAAGTTCACAAGGGGATGGAAATTCTTCACAAGTGGATGGAAGCACTTCGCAAGCAGCTGACTCCTGCGTCTCCAAGCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCAAGGATACATCCTTAGATATTCTCAGACTTCTCCAAACATATGGAGCTTCGTTCTCTCAGCACCGAACCCAAATTCTTACATAGCATTTGGATTCTCTCCCAATGGAGGTATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAGTGGGTTAGGTGGAGGCATGAAACAGTATTATCTAACAGGACTCGCACCAAACCAAGTGGTGCCAGATAGAGGCAACTTGAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTAGAAACCAACCAACCTCTGTCCCAGTTGATTTATGCCTTTGGACCAAACGGTGTGTTCCCTTCAACACCAAGTTTTGCATTAACACACCACCAAGACAAAGTCTCCATTACGTTGAATTACGCAACAGGTTCAAGTGCATTGGGAAACTCATACATGAACCTGAAAAGAAGCCATGGAGTGTTGAATATCTTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGTTACTTCAGGGAATGGGATCCATTTTGGTTTTATTTCCACGCATCAGTTCAATCATTGGGTTTTGTTCTGGGAGTAATTGGTGTAATTAGTGGTCTTGTCTTGAATAATCAACTCCATGTTGACGTTAGTCTTCACAAGGCTCTTGGAATCATCATTTTCGTTCTAGCCTGCCTCCAGATAATGGCTTTGCTTGGTCGACCAAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATTTATACCATCATAACACGGGGAGAATTTTGATCATACTAGCCGTGGCTAACATTTTCTACGGAATCCGATTAGGGAAGGAGGGAAGTGGATGGAATATAGGTTATGGGATTGTTCTGGCCATATTACTCACCATGGCAATTACTTTTGAGACTCAACTGTGCAGTAGAGACTAA 1668 0.443 MKALRLLFMMTYLGSFFLASPEADSCTSNLSLNVSIPFDTTNLHCLSVWDAQSFILRYAQTSVNIWSFILSTPDANSYIAMGFSVTGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSTFITLQSSRLFMVFQLQTTEPLSSLIFATGSTGLFPGPPSFVLTKHLDKVSTRIDYSKANIGSSQGDGNSSQVDGSTSQAADSCVSKLNLSVPLLFDTTNLNCLPVWNAQGYILRYSQTSPNIWSFVLSAPNPNSYIAFGFSPNGGMVGSSAIVGWISSSGLGGGMKQYYLTGLAPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLETNQPLSQLIYAFGPNGVFPSTPSFALTHHQDKVSITLNYATGSSALGNSYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHASVQSLGFVLGVIGVISGLVLNNQLHVDVSLHKALGIIIFVLACLQIMALLGRPKKESKVRKYWNLYHHNTGRILIILAVANIFYGIRLGKEGSGWNIGYGIVLAILLTMAITFETQLCSRD 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01928 555 Gene3D - 370 551 - -
Spst4g01928 555 SMART 561_7 399 520 IPR006593 -
Spst4g01928 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 215 552 - -
Spst4g01928 555 CDD DOMON_DOH 244 377 IPR045266 -
Spst4g01928 555 CDD DOMON_DOH 44 180 IPR045266 -
Spst4g01928 555 ProSiteProfiles DOMON domain profile. 244 356 IPR005018 -
Spst4g01928 555 SMART DOMON_3 270 356 IPR005018 -
Spst4g01928 555 SMART DOMON_3 78 164 IPR005018 -
Spst4g01928 555 CDD Cyt_b561_FRRS1_like 377 548 - -
Spst4g01928 555 ProSiteProfiles Cytochrome b561 domain profile. 363 555 IPR006593 -
Spst4g01928 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Spst4g01928 555 ProSiteProfiles DOMON domain profile. 52 164 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01928 Spst-Chr4 59945410 59952133 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01928 - - gmx:100803524 1005.74