Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01927 ATGCCTCCTTCGACTTCGTGGCTGGTGCTCGCTATTCTCGCGCTGACGGCGCCGGCGACGCCTCCAGCACACGCCGCGCCAGTCGCGTCGTTCGATGGTCAGCGAGAGTTTGACTATTTCGCGTTGGCCTTGACATGGCCCGGCACTTACTGCCAGCGCACGCGCAGTTGTTGTCCCTCCAACGGTTGCTGCAGAGGCCCCAATTCTCCGACAACATTCACCATACATGGACTTTGGCCTGACTATAACGATGGAACCTGGCCATCTTGTTGTTCTGGAGCTAGTTTCAATCCAAAAGAGATATCTAGTTTGACTAATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTGGCAAGCCATCAACATGCCATGGCGGGAAAGGTTCATTTTGGGCTCATGAGGTGGTTGTCGGAGTTAATTATTACATCTCTATTGAGAAACATGGCACATGCTCTTATCCTGTGTTTCGAAATGAATATGATTATTTTCTGGCAACTCTGAATATCTATTTCAAATATAATGTTACGAGCGTTCTAAATGATGCTGGATATGTTCCCTCTAATACAGAAAAGTATCCCCTTGGAGGCATTATCTCTGCCATTGAGAATGCTTTTCATGCATCCCCTTTAATTGTCTGCTCAAAAGATTCTATTGAGGAACTTCGCCTATGCTTTTACAAGGACTTCCAAGTATGA 696 0.467 MPPSTSWLVLAILALTAPATPPAHAAPVASFDGQREFDYFALALTWPGTYCQRTRSCCPSNGCCRGPNSPTTFTIHGLWPDYNDGTWPSCCSGASFNPKEISSLTNALEQYWPSLSCGKPSTCHGGKGSFWAHEVVVGVNYYISIEKHGTCSYPVFRNEYDYFLATLNIYFKYNVTSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPLIVCSKDSIEELRLCFYKDFQV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01927 231 CDD RNase_T2_euk 37 228 IPR033697 -
Spst4g01927 231 ProSitePatterns Ribonuclease T2 family histidine active site 1. 73 80 IPR018188 GO:0003723|GO:0033897
Spst4g01927 231 PANTHER RIBONUCLEASE T2 29 229 IPR001568 GO:0003723|GO:0033897
Spst4g01927 231 Gene3D - 33 231 IPR036430 GO:0003723|GO:0033897
Spst4g01927 231 SUPERFAMILY Ribonuclease Rh-like 36 230 IPR036430 GO:0003723|GO:0033897
Spst4g01927 231 FunFam Ribonuclease T2 33 231 - -
Spst4g01927 231 Pfam Ribonuclease T2 family 37 229 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01927 Spst-Chr4 59939253 59942655 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01927 K01166 - gmx:100789614 393.66