Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01922 ATGGAGGTTGGATTTTTAGGTTTGGGGATAATGGGCAAGGCTATGGCAACTAACCTGCTACGCCAAGGCTTCAAAGTCACTGTTTGGAACAGAACCCTCACCAAGTGTGAAGAACTTGTGAAATATGGTGCTTCTGTTGGAGAAACACCAGCAACTGTAGTCAAGAAATGCAAGTATACAATTGCCATGTTATCTGATCCTTCAGCTGCTTTATCGGTTGTGTTTGACAAAGATGGTGTTCTTGGTCATATTAATGGAAAAGGTTACATTGACATGTCAACAGTTGATGCTGATACATCTTCCAAGATATCTGAGGCAATCAAAGCAAAAGGGGGTTACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAACTAGTTATACTTGCTGCTGGGGACAAGGCATTGTACGATGAAGCACTTCCTGCATTTGACGTACTGGGGAAGAAGTCTTTCTTTCTGGGTGAGGTTGGAAACGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACCCTAGCTGAAAGAAGTGGTTTGAACCCTGCAACTCTTCTTGATGTGCTGGATCTTGGTGCCATAAGTAACGGCATGTTTAAATTGAAAGGACCTACAATGCTCCAAAACAGTTACTCCCCAGCTTTTCCGCTGAAACACCAGCAGAAGGACATGAGGTTAGCTCTTGCCCTTGGAGATGAAAATGCTGTATCAATGCCAATAGCAGCTGCAGCAAATGAGGCTTTCAAAAAGGCCAGAAGCATGGGGTTGGGAGACCTTGATTTTTCCGCAGTTCATGAGACTTACAAAGCTCCTGATCATTCATCTTGA 873 0.4387 MEVGFLGLGIMGKAMATNLLRQGFKVTVWNRTLTKCEELVKYGASVGETPATVVKKCKYTIAMLSDPSAALSVVFDKDGVLGHINGKGYIDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLVILAAGDKALYDEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPATLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSMGLGDLDFSAVHETYKAPDHSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01922 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 284 IPR008927 -
Spst4g01922 290 PIRSF HIBADH 1 290 IPR015815 GO:0016491
Spst4g01922 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 284 - -
Spst4g01922 290 Gene3D - 1 162 - -
Spst4g01922 290 FunFam Glyoxylate/succinic semialdehyde reductase 2 163 287 - -
Spst4g01922 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
Spst4g01922 290 FunFam Putative oxidoreductase GLYR1 homolog 1 162 - -
Spst4g01922 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Spst4g01922 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Spst4g01922 290 Gene3D - 163 285 IPR013328 GO:0016491
Spst4g01922 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01922 Spst-Chr4 59893153 59898707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01922 K18121 - gmx:100802847 535.413