Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01912 ATGAAGGATTCCAATTCGGATCTATTTGACCCGGTTGTGGCCATGGAGTCCGACTGGTCTCGCGCCGGTTCCAATTCCGATGCCGATTTCGCCTTCGCCTTCAACGACAGTAACTTCTCCGATAGGGTTCTCCGGATCGAGATCATGGCCGACCCCGCCGACGCCCGACCCGACTCAGACGGGTGCGCCACCATTGCCGATTGGGCGCGCCACCGCAAGCGCCGCCGGGAGGATATCAGAAAGGATAACGGCGCGGATTCTGCTGCCGTGCCAGACGAGCAAGTTTTGAACGGGAATCAACCGGATGTGGATGAGCGTGAAAACCAAGACGAGGAGGCTGTTGCAATGGTTGAAGAACCCAATTCTGGTGATGAAGCTACAAATAGTCATGATTCAGACTGGAGCATGGACTGCTCTGCAGGTGTAGTTGTTAGAGTTAAAACGCTGCACATAAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTGTCCCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTAATGGAGCTGCTGAACTTTATGTACAGTAATACCTTGACCACTACTACAGCACCAGCTTTGCTGGATGTGTTGATGGCCGCTGATAAATTTGAAGTTGCTTCATGCATGAGATACTGTAGCCGGTTATTGCGCAACATGCCTATGACACCTGACTCTGCTTTGCTTTATCTGGAGCTTCCTTCTAGTGTTTTAATGGCTGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTTATGGCATTGCCCCTAGCTGGAGTAGAGGCAATACTATCTAGCGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGATTTTGTTTTGAGGTGGTCTCGGCAGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGTGCCCATCTTGCACGTTTAATTCGCTTCCCTTACATGACTTGCCGAAAGCTTAAGAAGGTGTTGACCTGTTCCGACTTTGACCATGATGTTGCATCCAAGCTTGTACTAGAGGGCCTATTTTTCAAGGCTGAGGCTCCACACCGCCAACGGGCACTGGCAGCAGAAGACTCTGCTTCTTCAAACCGGCGATTTGTGGAGAGGGCATACAAGTATCGCCCAGTGAAGGTGGTTGAATTTGAACTTCCTCGGCAGCAGTGTGTGGTGTATTTGGATCTGAAGCGTGAGGAATGTGCCAATCTGTTCCCATCTGGCCGGGTTTATTCTCAGGCATTCCATTTGGGTGGACAAGGTTTTTTCCTTTCAGCACATTGCAACATGGATCAGCAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGCTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCCAGGTCTAGGCCAACAGAGGAATTTGTTAGCAAGTACAAAGGTAACTACATGTTCACAGGGGGAAAGGCCGTTGGCTATAGAAACTTGTTTGCTATTCCATGGACCTCGTTCATGGCTGAGGATAGTCTTTACTTCATCAATGGTGTCCTCCACCTTAGAGCTGAGCTCACCATCAGGCACTAA 1653 0.49 MKDSNSDLFDPVVAMESDWSRAGSNSDADFAFAFNDSNFSDRVLRIEIMADPADARPDSDGCATIADWARHRKRRREDIRKDNGADSAAVPDEQVLNGNQPDVDERENQDEEAVAMVEEPNSGDEATNSHDSDWSMDCSAGVVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVSLRINASEEAALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLRWSRQQYPKLEERREVLGAHLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYMFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01912 550 Pfam BTB/POZ domain 142 235 IPR000210 GO:0005515
Spst4g01912 550 MobiDBLite consensus disorder prediction 73 87 - -
Spst4g01912 550 SMART BACK_2 253 355 IPR011705 -
Spst4g01912 550 FunFam BTB/POZ domain-containing protein POB1 272 376 - -
Spst4g01912 550 SUPERFAMILY TRAF domain-like 437 548 - -
Spst4g01912 550 MobiDBLite consensus disorder prediction 73 113 - -
Spst4g01912 550 CDD BTB_POZ_ZBTB_KLHL-like 137 221 - -
Spst4g01912 550 Pfam BTB And C-terminal Kelch 261 353 IPR011705 -
Spst4g01912 550 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Spst4g01912 550 SMART BTB_4 138 238 IPR000210 GO:0005515
Spst4g01912 550 SUPERFAMILY POZ domain 142 235 IPR011333 -
Spst4g01912 550 Gene3D Potassium Channel Kv1.1; Chain A 127 257 IPR011333 -
Spst4g01912 550 Gene3D - 270 375 - -
Spst4g01912 550 FunFam BTB/POZ domain-containing protein POB1 129 259 - -
Spst4g01912 550 PANTHER OS02G0260700 PROTEIN 17 549 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01912 Spst-Chr4 59797283 59800690 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01912 - - gmx:100776595 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01912 4 59797283 59800690 Spst4g01912 4 59797283 59800690 ECH