Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01911 ATGAAGGATTCGAATTCGGATCTGTTTGACCCGATTATGGCCATGGAGTCCGAGTGGTCCCGCGGCGGTTCCACTTCCGATGCCGATTTCGCCTTCGCCTTCAACGATAGTAACTTCTCCGACAGGGTTCTTCGGATCGAGATCATGCCCGACCCCATCGACGCGCGACCCGATTCAGACGGCTGTGCCACCATTGCTGACTGGGCGCGCCACCGCAAGCGCCGTCGCGAGGATATAAAAAAGGATAACGGTGCGGATATTGCTTCGGTGCCAGACGAGCAAATTTTGAACGGGAATCAGCCTGATTTAGATGAGTGTGAAAACCAAGATGAGGAGGCTGTTGCAATGGTTGAAGAACCCAATTCTGGTGATGAAGCCACAAATAGTATTGATTCAGACTGGAGCATGGATTGCTCTGCCGGTGCAGTTATTAGAGTTAAAACTCTGCATATAAGTTCTCCTATTCTGGCTGCAAAAAGTCCTTTCTTCTACAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTCACCCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAGCTGCTGAATTTTATGTACAGTAATACCTTGACCACTACTACAGCACCTGCTTTACTGGATGTGTTGATGGCTGCTGATAAATTTGAAGTTGCCTCATGCATGAGATGCTGTAGCCGATTGTTGCGGAATATGCCTATGACACCTGACTCAGCATTGCTTTATTTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCTGTCCAACCATTGACCGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAAGATATAACCAAGTTCCAGGAAGAGGTTTTGGCCTTGCCCCTAGCCGGAGTAGAGGCCATACTGTCTAGCGATGATCTCCAGGTTGCGTCAGAAGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCCTGGGTGCCCGTCTAGCTCGTTTAATTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTCTTGACTTGTACTGACTTTGATCATGATGTTGCATCCAAGCTTGTATTGGAGGGCCTATTTTTTAAGGCTGAGGCTCCTCACCGCCAAAGGGCACTGGCTGCAGAAGACTCTGCTTCTTCAAATCGTCGTTTTGTGGAGAGGGCATACAAATATCGCCCAGTGAAAGTGGTAGAATTTGAACTTCCCCGGCAGCAGTGTGTGGTGTACCTGGATCTGAAGCGGGAGGAGTGTGCTAATCTATTCCCATCTGGTCGGGTTTATTCTCAGGCATTCCATTTGGGTGGTCAAGGTTTTTTCCTATCAGCACATTGCAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGCTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCCAGGTCTAGGCCAACAGAGGAATTTGTCAGCAAGTACAAAGGCAACTATGTGTTCACAGGGGGAAAGGCTGTCGGCTACAGAAACTTGTTTGCTATTCCATGGACTTCGTTCATGGCTGATGATAGTCTTTACTTCATCAACGGTGTCCTCCACCTTAGAGCTGAGCTCACCATCAGACACTGA 1653 0.4803 MKDSNSDLFDPIMAMESEWSRGGSTSDADFAFAFNDSNFSDRVLRIEIMPDPIDARPDSDGCATIADWARHRKRRREDIKKDNGADIASVPDEQILNGNQPDLDECENQDEEAVAMVEEPNSGDEATNSIDSDWSMDCSAGAVIRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRCCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVLALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEERREVLGARLARLIRFPYMTCRKLKKVLTCTDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFMADDSLYFINGVLHLRAELTIRH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01911 550 PANTHER OS02G0260700 PROTEIN 13 549 IPR045890 -
Spst4g01911 550 Gene3D - 270 375 - -
Spst4g01911 550 SUPERFAMILY TRAF domain-like 437 548 - -
Spst4g01911 550 FunFam BTB/POZ domain-containing protein POB1 272 376 - -
Spst4g01911 550 Pfam BTB And C-terminal Kelch 261 353 IPR011705 -
Spst4g01911 550 SUPERFAMILY POZ domain 148 235 IPR011333 -
Spst4g01911 550 CDD BTB_POZ_ZBTB_KLHL-like 143 221 - -
Spst4g01911 550 Gene3D Potassium Channel Kv1.1; Chain A 127 260 IPR011333 -
Spst4g01911 550 SMART BACK_2 253 355 IPR011705 -
Spst4g01911 550 FunFam BTB/POZ domain-containing protein POB1 129 259 - -
Spst4g01911 550 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Spst4g01911 550 SMART BTB_4 138 238 IPR000210 GO:0005515
Spst4g01911 550 Pfam BTB/POZ domain 147 235 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01911 Spst-Chr4 59778978 59782265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01911 - - gmx:100776595 1035.4