Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01907 ATGAGTGAGGAAAGTGATACCAAACGGCAAAATACCCATCAAGAAACACCGAAAATCCTAGAACCTCAGAGACTAATCAGTGAAAGAAGCAATCCCAAGCAGAAATCAAATTCCAAAGACGCACACACGTGGGGGTGGATAGTGTCTTCTCTGCGGGAAGAGGGAAGCGCGTGCAGGGCGCGTGGGAACAAAAATGAAGAAATTCTTCTTAGAGAAACCCTAATGAACGAAAACATTGAAGTGGTGGTGATGGAGATGGATTTTAGATGGAGCAGTGGAAAGTGGAAACCCAAGAAGAGAAAAAGGAGCAGAGCAGGTGTTAACGTAAGGCCAAGGCAAGTACCACCAATTGGTGTTGCTACTCCCCGTAAATCTGCGCGAAATTCCTTGTGCCCCGAGAAGGTTACTAGTTTTGGTATTTGCGAGTGCAGTGCAATCCCAAATGGGTATGTTTGGCTTCCCATGAACCACACCATGCATTTTCTCTGCAAAGGTTTTGTGAACCTTGGTGTTATGCCTGGAGTTGTAGTACTGAGAAGCTTATTAGTATTGAAATCTGATACTAATCCTGTACTTAATTGTGAAATGCAGAGTTTGCCTCTGGAGTCACCAAGAACCATGGACTCATACCCATACCAGATAAACCAAATGCCATTCCCTCACTATTACCATCCTGGTATTGAGGCTCTTCCCCCTCAAATGAATGTTGATCCAACCAAACTACCCTTTTCTTATGACCAACGTTGTTCCTATGCTGGCAATTATGGACACCCTATTCCCCCACATTTCTGCTGTGGCCACAACAACTTCCCTTGTCAATATAGCTACATGCCTTCACATCCTCACGCTCCTTCTCCAATGTACTATTCTGGAGGTTGTCCTGCATATAGTGAACCATATTTTGTTCCTAATTCCCCACATCCACGTCATACTATGGAGCTTCCGAGATATGAATATGACAAATATATGCCTCGTGACCATCATTGTTGTGGTTGTCCTAATCATTCATGCAACCAAAAGGAAGGTAAAAGTGTGAAGATTGAAGAGCATGAACCTGATGGTGGAAAGAATGTCAATGATGCTTTGGTTCCTATCCAGCTCAAGAACTATCCATATCCCGTTGTTTGGATTCCACAGGATTACCCAAGTAACAAACAGCTGAAGAATCCTAGTACAATGGAGGTTGGTGAACAAAACAAGCCTCCTAGCCTTGAGAATTCTGACGCTGGTGTACAACCAGCACACGAGCCTAGAGTATGGAATGGATGGTTACCCTTTGATATAAAGGGTGCCCCAAACATGATTCCTGATGGATACGGAGTAAGAAACCAGAAACAGGAGTCTGGCAACTGTAGAGGGGAATCTGAATATGGAGAAATGGACCAGAAAATTCAAAGTGAAAAGAAGAGGTCAGAATTTCCTTTCCCTATCTTCTGGTTGCCTTATTACAATAAGCAGGAGAGTGAAGAAACTAACGACAAGGAGAAGAACGCATCTCCTCCTAAGATCATTGAGGAGGTGCCTCATGCACTTAAATATGTTCCAGTAAAGTCTTATGTTGATGAATGTGGTAGGAATGGAACCGGATCAAATCAAGCTGAACACACAAATAGAAATGCTTCGAATGTCGTAGAGAAAGTGACTAATGCCAGAAGCATACCAGTGAAGCAGATAGGAAAAGATGTTCGTCCAGATCGAATGGACGAGAATGAGACAAAAAAGGACTCCTGCACTGGTGACAAAAAGAAACAATCTACATTTTCACCAAAAGCTTCAAAGTTACCTCCTGTTTGTCTGAGAGTTGATCCACTACCAAGGAAGAAAAAGGGCAATGGGAGTTCGAGGTCCCCGAGTCCACCTTCCTCAAAAGGACATTCCCAAGTGACATCTGGTGAAACAATAAAGACTCCTGTGTGTGGCACAAATGACCAGGCTCAGCCAAAATTGAATAATCAGAATGCTCCAAACACCAGTGAGGAAGTTAAACCGAAGGAGAAGACCATTCAGGTGTCTGAATATAAAACTAATGAAAACAAGGGTGTTGACAGGAGGGATGGATGCCATGGCAAGATAAATGTAAACATAACCAGTGAACATCCGAAAGGGACAAGGGAAACCTGCACAGACGGGGATGCATACAAGGCTACAGATAAAAAGGCAGGGCAAGGAGCAGAAAATATGTTGGAGGAAAATACTAAACTTAGGGAAGTGAAGGATTCTAGCGCACTCTCTGATGTTCGTAGTAAAGAGGGAAGGGTCTTGTCAGATGCAGATGCTGCTATTTTAATACAAGCTGCATATCGCGGCTATCAAGTTAGAAAATGGGAACCATTGAAGAAATTAAAGCAGATAGATGAAGTCAGAAAGGAGGTGATTAATGTTCAAGACTGTGTTCAAGCTTTTGAGAGATCATCTGGTCTTCAAAATGATGACAAGCAAAAAATTGCAATTGGAGAGACCATAATGAGACTCCTGCTGAAGTTGGATACTTTACAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCTTGGCTAGAGAGCTCATAATCTTGCAAGAAAGGCTTGATTCTTTAGCTGCTAATAAACCTCAGCAGCAGATGCAGGATTTCCATGTTCAGAAAGATGTTGACGTGACTCCAACTACCATGCAGAATGAAGAACATGTGCAAAGGGAGGAAGAAGAAAAAGTTTCTATACCAGGAGATTCATCTGAAGGCATTAGTGATGATGGAAAAGTATCTCAGTCACCAGTTGATCCTGTACCGAATGAGGGAGCAGAGTCTGTTGTGCTTCCAAATGGTTCGGGTAGTGAGGATACTAGCCAAGTCGGAACAGCTGATACATTGAATTCTACAAGTGATCTGCCTGAGACTGACAATATGGCTGGGTTCACTACCCAAGTCGTTACAGCTGATACATTGAATTCTACAAGTGATCTGTCTGAGACTGACAAAATGGCTGTGGAACCCAAAGCCAAATCAGAAGTGAACGACAGTCCCGTAGAAGTTAATGAATTGGATATAACTGTTGGGGAAGAATTACCGGTGGGAGTTATTGATGAAGATATCAATAGTATCGAGATGGAAGAACACGATAATGTTGGTTCTGGAAGTCTACCACCAGCCATGGTGAATGATTCTGCACTAGATAGATTAGATTCAGAGAACCATGCAGTGATGGAACTTCCAGTGGGATTACTTGATGAGGATGAAAGAAAGAATGAAATGAATCTTTCTAAAGGAGAAAGACAAACTGAAAATGAGATATTCTTTGAGGAGCTGCCAGTGGGACTACTTGATGAGAATCCAGAAAAATCTGAAGTTGAAGCTAACCGTAAAACATATGCAGTGGTTCCACCAGCTCAAGAAGAACGATGTAATGCAGATGAGAAAACAACTTCCACAGATGACCCTTCAAAAGAAACTCAGCTTGAGCAACAGCAGCAGCAGATGGAAAATCAAGATGAGGTGCAGTCTTCTGGGGAATCAGATGGATGGGTAAAGGTTGAGTTCAACAAAGAAGATGAACTCAAAGGGGATTTACCAGTGGATATAGGGATTGAGACTCAGTCAGGTGAATTTGGAATTGGTACTGAGTTGCCACCTTTGACAACACAAGTCAATGATCATGAAGCAGGAAGTAAAGATGTGTGTTTGGAGGCAAATGATGTAAACATCTCACCCCAGCCAAAAGAGTTCGTACCAGTTAATGACACACAGAAGGAAGAGGAACCAGAAGGAAAGATCGCACTGAAGGAGATACAAGATGATCAAGAGATAGTTGCTGAAATTTTGGCTCATGAGAAAACAGAACCATCTGTAGCATCACCTGCATTACCAGAGCTTGAGATACCTGCAGCTGAACATGATGGACGTCTAAAGAGTGACTCAAAGTTAGTGGAGGAAAATGAGAAGCTAAGGAAGATGATGGAGAAGTTGCTTGAAGCTGGGAATGCGCAGTTAAGTGTAATATCAGATTTAACTGGCAGAGTGAAGGACTTGGAGAAGAGATTAGCCAGGACCAAGGCCAGGAGCAAGAGAGTGAAGACAAAACGGCATAGACCAGCAACTTCCAACTTTCTTGCATAA 4092 0.4272 MSEESDTKRQNTHQETPKILEPQRLISERSNPKQKSNSKDAHTWGWIVSSLREEGSACRARGNKNEEILLRETLMNENIEVVVMEMDFRWSSGKWKPKKRKRSRAGVNVRPRQVPPIGVATPRKSARNSLCPEKVTSFGICECSAIPNGYVWLPMNHTMHFLCKGFVNLGVMPGVVVLRSLLVLKSDTNPVLNCEMQSLPLESPRTMDSYPYQINQMPFPHYYHPGIEALPPQMNVDPTKLPFSYDQRCSYAGNYGHPIPPHFCCGHNNFPCQYSYMPSHPHAPSPMYYSGGCPAYSEPYFVPNSPHPRHTMELPRYEYDKYMPRDHHCCGCPNHSCNQKEGKSVKIEEHEPDGGKNVNDALVPIQLKNYPYPVVWIPQDYPSNKQLKNPSTMEVGEQNKPPSLENSDAGVQPAHEPRVWNGWLPFDIKGAPNMIPDGYGVRNQKQESGNCRGESEYGEMDQKIQSEKKRSEFPFPIFWLPYYNKQESEETNDKEKNASPPKIIEEVPHALKYVPVKSYVDECGRNGTGSNQAEHTNRNASNVVEKVTNARSIPVKQIGKDVRPDRMDENETKKDSCTGDKKKQSTFSPKASKLPPVCLRVDPLPRKKKGNGSSRSPSPPSSKGHSQVTSGETIKTPVCGTNDQAQPKLNNQNAPNTSEEVKPKEKTIQVSEYKTNENKGVDRRDGCHGKINVNITSEHPKGTRETCTDGDAYKATDKKAGQGAENMLEENTKLREVKDSSALSDVRSKEGRVLSDADAAILIQAAYRGYQVRKWEPLKKLKQIDEVRKEVINVQDCVQAFERSSGLQNDDKQKIAIGETIMRLLLKLDTLQGLHPSFREIRKSLARELIILQERLDSLAANKPQQQMQDFHVQKDVDVTPTTMQNEEHVQREEEEKVSIPGDSSEGISDDGKVSQSPVDPVPNEGAESVVLPNGSGSEDTSQVGTADTLNSTSDLPETDNMAGFTTQVVTADTLNSTSDLSETDKMAVEPKAKSEVNDSPVEVNELDITVGEELPVGVIDEDINSIEMEEHDNVGSGSLPPAMVNDSALDRLDSENHAVMELPVGLLDEDERKNEMNLSKGERQTENEIFFEELPVGLLDENPEKSEVEANRKTYAVVPPAQEERCNADEKTTSTDDPSKETQLEQQQQQMENQDEVQSSGESDGWVKVEFNKEDELKGDLPVDIGIETQSGEFGIGTELPPLTTQVNDHEAGSKDVCLEANDVNISPQPKEFVPVNDTQKEEEPEGKIALKEIQDDQEIVAEILAHEKTEPSVASPALPELEIPAAEHDGRLKSDSKLVEENEKLRKMMEKLLEAGNAQLSVISDLTGRVKDLEKRLARTKARSKRVKTKRHRPATSNFLA 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1 15 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 882 1009 - -
Spst4g01907 1363 SUPERFAMILY BAG domain 775 859 IPR036533 GO:0051087
Spst4g01907 1363 SMART BAG_1 783 860 IPR003103 GO:0051087
Spst4g01907 1363 MobiDBLite consensus disorder prediction 386 406 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 99 123 - -
Spst4g01907 1363 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1224 1246 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 985 1001 - -
Spst4g01907 1363 Pfam IQ calmodulin-binding motif 758 775 IPR000048 GO:0005515
Spst4g01907 1363 MobiDBLite consensus disorder prediction 558 581 - -
Spst4g01907 1363 Gene3D BAG domain 765 864 IPR036533 GO:0051087
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1125 1139 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 27 41 - -
Spst4g01907 1363 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 1103 1355 IPR040400 -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 887 901 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 659 689 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 934 984 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 386 412 - -
Spst4g01907 1363 ProSiteProfiles BAG domain profile. 783 860 IPR003103 GO:0051087
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1140 1162 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 524 710 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1 41 - -
Spst4g01907 1363 FunFam BAG family molecular chaperone regulator 6 773 864 - -
Spst4g01907 1363 Coils Coil 1297 1317 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 524 548 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1339 1363 - -
Spst4g01907 1363 Pfam BAG domain 784 858 IPR003103 GO:0051087
Spst4g01907 1363 Coils Coil 1325 1352 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 1095 1176 - -
Spst4g01907 1363 Coils Coil 842 862 - -
Spst4g01907 1363 MobiDBLite consensus disorder prediction 611 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01907 Spst-Chr4 59726913 59742526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01907 - - gmx:102668563 1483.39