Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01893 ATGAAATATTTCAATATTCTCAGCCCTGAAGATAAGGGAATGACAAAACAGAATGTTAATACCAAGTTAAAAAAATGGAGAAGTGTTTACTATTTTATCTTTATACCGGGTGCTCTTGCTCTTCTCCTTTCTGTTGCGGCCATGTCCAAGTTCCTCTCCAAATCATTTCTTGGTAATGAATCTTTATACTCAAATCTGAATCCTGGGGTCCCAAATGGGAATGAACATGAAGTGATGATGATAACTGTTGAAATTGTGATTCAGAAAATTCAAGATCAACTGAACAAACTGAGGGAAACAAGACAGGATCCATCGTCGTCCCCATTTGTATTCCAGCAAGCTGCATTTCTTGCTGATATAGTAGGACTTCTTGAGTCAGCAGCGGCGTCTCATCAACACAATGAAGGGAAAAATCAGCAAAACGGTAGTTTCACCACTCATCCTCTGGTGAGAAAAAAGAAACGATCAGATGAACCTGCTGATTACTTTCTGCGAGAAGAGATTCGCAAGTATGTCAGGATCAAGCCTAACAGATTAGGAAAACAAAATTTTATGGGGGCTAATGCAAGCTTCACCAGCATAGGACACGCGTGTTTTGCCATGAAGGAAGCGCTAGAAGAATACATGGATTATGATGTTGGTGAGATCTGTAATGATGACTGGAAACTAGCTCAAAAGCTTATGGTTCATGGCTGTGATCCTTTACCAAGGAGAAGGTGTTTTTCAAGGGCCCCTAAGCTATACAGCCAACCATTTCCCATCACCGAATCCCTGTGGAAACTCCCTGATGATAGAAATGTTAGATGGAGTCAATACCGGTGCAAGAACTTTGCTTGTCTAGCTGCCAACACCACTCGTAAGGGATTCTTTAAGTGTGCAGACTGCTTCAACCTCACCAACCATGAGATGCCTCGATGGGTGAGCCTGGAGGTTGATTCAAACCAGACAGCTGATTTCCTTATATCTGATGTTCTTGGAATTAAGCCAGGAGAGGTCAGAATAGGATTGGACTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAGTTTCAGCCTCTATAAATTTTGGGGCACCCTTCAATGAAATGATAGCCCTTAGAGGACTTGTTCCTCTCTACTTGACTATTAATCAAAGGCTTCCATTTTTTGACAATACCCTGGATTTGATTCACACAACTAGGTTTCTAGATGGATGGATTGATTTTGTGCTCCTTGAGTTCATATTGTATGACTGGGATAGAGTTCTGAGGCCAGGGGGGTTGCTCTGGATTGACAGTTTTTTTTGCTTGAAGGAAGATTTGTATGATTACTTGAAGACCTTCAAAATGCTGAGATATAAAAAACTGAAATGGGTGGTTGTTCCAAAGCTTGATAAGCATGATCAGGAAATGTTCTTCTCTGCTGTCTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1458 0.4143 MKYFNILSPEDKGMTKQNVNTKLKKWRSVYYFIFIPGALALLLSVAAMSKFLSKSFLGNESLYSNLNPGVPNGNEHEVMMITVEIVIQKIQDQLNKLRETRQDPSSSPFVFQQAAFLADIVGLLESAAASHQHNEGKNQQNGSFTTHPLVRKKKRSDEPADYFLREEIRKYVRIKPNRLGKQNFMGANASFTSIGHACFAMKEALEEYMDYDVGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYSQPFPITESLWKLPDDRNVRWSQYRCKNFACLAANTTRKGFFKCADCFNLTNHEMPRWVSLEVDSNQTADFLISDVLGIKPGEVRIGLDFSVGTGTFAARMREFNVTIVSASINFGAPFNEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLEFILYDWDRVLRPGGLLWIDSFFCLKEDLYDYLKTFKMLRYKKLKWVVVPKLDKHDQEMFFSAVLEKPPRPFR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01893 485 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 305 477 IPR029063 -
Spst4g01893 485 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 326 433 IPR004159 GO:0008168
Spst4g01893 485 MobiDBLite consensus disorder prediction 131 155 - -
Spst4g01893 485 Coils Coil 80 100 - -
Spst4g01893 485 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 61 483 - -
Spst4g01893 485 Gene3D Vaccinia Virus protein VP39 305 464 IPR029063 -
Spst4g01893 485 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01893 Spst-Chr4 59515871 59517328 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01893 - - var:108346439 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01893 4 59515871 59517328 Spst4g01893 4 59515871 59517328 ECH