Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01889 ATGGCGTCTTTGTTACGAGCGAGAAACACTTCTCCTGGCTCTATGGCGAGGCTTCTTCGGTGCTTCAGCAACGTTCCCGAGAACACAGTCTATTCGGGTCCCACAGCGCAGAACCCGAACAAGCGAGTCACGCTCAGACACTTGACAGAGAAGTACCGATCATTCCAACCCATAACCATGGTCACCGCCTACGATTACCCCGCCGCCGTCCACCTCGACACCGCCGCCGTCGACATCTGTCTAGTCGGAGACTCCGCTGCCATGGTGGTCCACGGCCATGACACCACTCTCCCCATCACGCTCGACGAGATGCTCGTCCACTGCCGCGCCGTGGCGCGTGGCGCCAAGACGCCGCTCCTCGTCGGGGACTTGCCTTTCGGGACCTACGAGTCCGATTCCAATCAGGCAGTGGATACAGCTGTTCGGATTTTGAAGGAAGGGGGAATGGATGCCGTAAAACTCGAAGGAGGGTCTCCTTCTAGAATTGTTGCAGCGAAGGCTATTGTTGAGGCTGGAGTTGCTGTTATGGGCCATGTGGGTCTTACTCCTCAGGCCATTAGTGTTTTAGGGGGGTTTAGACCTCAAGGAAAAAATGTTGCTAGTGCTGTCAAGGTTGTAGAGACTGCATTGGCTTTGCAAGAAGCAGGGTGTTTTTCTGTTGTTCTGGAATGTGTGCCTGCGCCCGTTGCCGCCGCAGCAACAGCAGCCCTTCAAATTCCTACAATTGGAATTGGGGCTGGACCCTTTTGCAGTGGACAGGTGCTGGTTTACCATGATCTGCTTGGTATGCTACAACACCCCCACCATGCAAAGGTTACTCCAAAATTTTGTAAGCAATATGCACGTGTAGGAGACGTAATCAATAAAGCCTTACTGGAGTACAAGGAAGATGTTGTAAATGGTTCGTTTCCTGATGCTCACCATAGCCCATACAAAATCAGCAAGACAGATGCAGATGTATTTTCAAATGAGTTGCAGAGGTTAGGTTTGGACAAGGCAGCATCTGCAGCATCTGAAGCAGTTTATAAGATGGATACGGCTAAATCAACTAAACCTCCCTACGCATCACGCAACGAATGTGATCATGGGTGA 1092 0.5165 MASLLRARNTSPGSMARLLRCFSNVPENTVYSGPTAQNPNKRVTLRHLTEKYRSFQPITMVTAYDYPAAVHLDTAAVDICLVGDSAAMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYESDSNQAVDTAVRILKEGGMDAVKLEGGSPSRIVAAKAIVEAGVAVMGHVGLTPQAISVLGGFRPQGKNVASAVKVVETALALQEAGCFSVVLECVPAPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVVNGSFPDAHHSPYKISKTDADVFSNELQRLGLDKAASAASEAVYKMDTAKSTKPPYASRNECDHG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01889 363 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 43 310 IPR003700 GO:0003864|GO:0015940
Spst4g01889 363 Pfam Ketopantoate hydroxymethyltransferase 42 305 IPR003700 GO:0003864|GO:0015940
Spst4g01889 363 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 34 326 IPR003700 GO:0003864|GO:0015940
Spst4g01889 363 Gene3D - 40 322 IPR040442 -
Spst4g01889 363 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 42 308 IPR015813 GO:0003824
Spst4g01889 363 CDD KPHMT-like 45 304 IPR003700 GO:0003864|GO:0015940
Spst4g01889 363 NCBIfam 3-methyl-2-oxobutanoate hydroxymethyltransferase 42 309 IPR003700 GO:0003864|GO:0015940
Spst4g01889 363 FunFam 3-methyl-2-oxobutanoate hydroxymethyltransferase 40 315 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01889 K00606 - gmx:100808841 608.216