Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01884 ATGCCCCTTGAAATTCGTCAATGGATTCGTGGAGGAGATGAACCGGAAGGTGAAAAGATTGTCGCTGAAAACTTTCAAAGAATCATTGACACTCGAAAAGTTTCAAGAGGAATTGGTGAGTTAGTATACCGGTTTGGAGAGATGAGTTTTTCAAGAGAAGTTGCGCACCCAATATTTCAAATAGATAATCTGCCTCCAAGCATGGACTCTTTGGGGCCTTTTGGCAAAGTTGTCGAAAGAGTGATTGATTCTGTATGGGACCATGTTGTTCGGCAAGTGACTTACATCCTCCATTACAAGCAAAATGTTGTTGAACTGAAACATAGTGTTAAGGATCTCAGATTGGAAAAGGAGAGGATAGATCATCAACGCGATGCGGCTGAGAAAAATCTACACAACATTGAAGGTAAGGTTACAGAATGGGTTCAACAAGTGAGTGAATTTGAGAGTACAGTGGAGGAGTTTGAGAACGATGAAGGCCACAAAAGGGCCCGGTCGCCCAATTGTTATGTTTTTTCTTACTTGCGGAATAGACACAGGTTAGGCAGACAAGCGAAGAAGATGGCAGTGGATGTTAAAAAGCTAAAAGATGAGTCCCCCAAATTTGATGAAGTTGCCTATCGGCAAAATGTAACATCTAATGATGCCACGTTGTCTAATGCTGGATTTGTAGAATTTGGTTCTACAAAATCCACAATGGAAAAGGTAATGAGACATCTTGAAGATTCCAGTGTGCGAATGATTGGATTGTATGGGCCAGGTGGTGTGGGTAAGACCACTTTAATCAAAGAAATTGCTAGGAAAGCTAAAGATAATAAGTTGTTTGATAGGGTTGCTAGAGTAGAAATAACAGCCAATCCTAATCCACAAAAAATTCAGGAAGAAATTGCTTACGTGTTAGGATTGAGATTGGAAGGAGAAGGTCAAAATGTGAGAGCTGATTGTCTAAGGAGGAGGTTAAAGAGAGAGAAGGGAAACATCCTTTTAATCTTGGATGACCTTTGGGACAAATTAGATCTAAACAAGTTAGGGATTCCACTTGATGATGACCAGGATGATGATTTAAGCAATAATAACAAGGATTATGATAAGGATCGCAAAGTGTTGAAAAAAGAAAAAATCCTTCATGATCACAAGGGGTGCAAACTTTTGCTAATTTCACGGAATAGAAAAGTATTGCATGAAGAAATGGATGTAAAGTCGATTTTTTGTCTAAAGGAATTAGATGAGAAGGATGCTTTGATGCTGTTTCAAAAGGTGGCTAAAATACCTAATGAAATGTCTGTCTCTAAACAAGAAATTGTGAAGAAGTATTGTGCAGGATTACCCATGGCAATAGTTACAGTTGCAAGGGCATTAAGAAACAAGAGTGAGTCAGTATGGGAAGCAACACTAGAACAACTTAAAAAGCAAGAATTGGTGGGAGTGCAGACATCGATGGATATTTCAGTGAAGATGAGTTATGACCATCTAGAGAATGATGAGATGAAGTCCATTCTCTTAGTTTGTGCTCAAATGGGCCATCAAGCACTAATTATGGACTTGGTGAAGTATTGTTTTGGTTTGGGTATACTTGAAGGGGTCTACTCGATTAGGGAAGCTCGGGAGAAAATTGATAGATCTATCCAAATGTTGAAAGACTCAGGATTAGTGTTGGACGGAAGTTCTAATATTCATTTCAACATGCATGACTTGGTTAGAGATGCTGCTTTGTCTATAGCACACAAGGATAGAAATGTTTTTACTCTAAGAAATGGCAAACTAGATTATTGGCCTGAACTCGAGAGGTTCACTTCTATTTCTGTATGCGACACTGATATCATTGACGGGCTTCCTAGAGTCATAAGTTGTTCTCAACTTCAATTTTTCCAAATAAACACTATTGATCCATCTTTGCAAATACCCGACAGTTTTTTTGGAGAAATGAAAAATCTCAGAGTTTTAATATTGACTGGGTTTCATCTATTAAACTTACCATCTTCCATTGAATTCCTATTACAGCTCAGAATGCTTTGTTTGGAGCGATGCACTTTACCTGACGACTTATCTAAAGTAGGAGAGTTGAAGAAAATAAGAATTCTCAGCTTCTCTGGATCTCAACTAAAAAAATTGCCACCTGAGTTAAGGGAATTGGATAAGTTACAACTGCTAGACATTAGCGATTGTTCCAAACTAGAGATTATTCCGCCTAATATAATATCTAGTTTGACACGTTTAGAAGAGTTATATATAAGAAAGAGCTTGATCAAAATGTTGGTGGAAGTAGAGACAAACAAAGTTCAAGATTTGTTTCTTTCTGAGTTGAAGAGTTTGCATGAGTTGAAAGTGGTGGACTTAAGCATCCCATGTGCTTCAGATTTGCCAAATCACTTGTTCTTTGACAAGTTAAAAGATTACAAGATTGTGATTGGAGACTTGGAAATGTTTTCTGTTGAAGACTTTAGGATGCCCAGTAAGTATGAATCATTCAGAGTTTTAGCATTGCAACTAAAGGATAACACTAACATTCACTCCCTGAAAGGCATAAAATTGTTGTTTAAAACCGTGCAAATTTTGTTGTTGGGAAAGGTAGATGGTGTTCAAAATGTTGTCAACGAGTTGAATACAGAGGGATTTCCAGATCTAAAACACTTATTCATCACAAATAACAATGACATCAAGTATGTCACTTCAACAGAATTGTCTAATTGTGTGAATGTCTTTTTTCCCAATTTGGAATCTCTATGCCTCTACAATCTAAGGAGTCTAGAGATGATATGTTACGGTCCTATTACAGTTGCGTCATTCACCAAATTAAAAACCATCAAGGTCGAGAGTTGTTACCATTTGAAGAATCTCTTCCTCCTTTACGTGGATAAATTTCTTACTAGTCCAGAAATGTATGAAATTTGTGAATGTAAATCTGAGATGGATAAATTTCTTGCTAGTCTAGAAACAATTGAGGTTTCTGAATGTAAATCCTTAAAGGAGATCCTTCAAATACCAGAGGATTATGGTAAGATTGAGTTTCTTGAGTTGAGCACTTTGACACTCCAGTCGTTACCATCATTTACAAGTTTTTATACCAAAGTTGGGGCTCAAAAAACTAGTGTGCAAAGGGACAAGGCGCCTCCTCTGTTTGGTGAACTGGTTGTAATTCCAAACTTAGAGAGCTTGAATTTATCTTTGAAGAAGCTGAAAAGCCTCATCATAAGTGAGTGTCCGAATATGAAGAAGATACTTGAAACTGAAGGAAATAGTGGAAACAAGGTCTGCATCTTCCCTAAATTGGAGGAATTCCAGCTTAGCAAAATGAATAGTTTAACAGATATGTGGCAAACGAAGGTTAGCGTTGATTCATTTTCTAGTCTCATTTCTGTGCACATAGTTGAATGCAATAAACTAGACAAGATTTTTCCAAGTCACATGGAAGGATGGTTTGAAAGTTTGGAAAACTTGAAAGTTTCTGATTGCAAGTCGGTGGAAGTGATTTTTGAAATCAAAGATTCTCAAGAAATAGATCCATCTGGTGGGATAGACACAAATTTGCAGCTTATTCTTCTGGAGTATCTCCCAAAGTTGAAGCAATTATGGAGCAAAGATCCAGAAGGAATTCTGAACTTTAAAACACTGCGAACTGTAGATGTAAAACATTGTGATGAATTGAGGAATTTGTTTCCAGCTTCTGTGGCCAAAGACTTTCCTAAGCTTGAACGTATGTCAGCATTGTTTTGTGGGAAAATGGTGGGAATTGTTGCAAGTGAAGATGCATCAGAAACTAACAAAGATCGATTGGTGTTTCCTGAATTGACCTGCATGAAATTATATTATCTATCAAACATCAAGAGTTTCTACGAAGGGAGACATCCTATAAAGTGCCCAAAGTTGAAGGAGTTGACCGTGGTCGGGTGTCACAAGCTTAAAATATTTTCCACAGAAACAAGTAAAACAACAAATGAAGGACACAAATTTGTGCTGTCAGCTGAAAAGGTATTCCCCAAATTGGAGTATCTGGAAATTGACATGGAAGAAGCGCAAAGGTGGTTATCTTTGAACTACCAAATGCACCGTTTAAAAGAGTTTCATTTGAGCTCAGTAGAAAGTGTCCATCTCCTCTACCAATTTCTGTACAGAATGCCAAATCTAGAAAACTTATACTTGACTGAGGACCATCGTGAAGTGTTAGTGCCAACTGCAAACAGTGCACCACAACAAATATTGGGAACCGTAATACAGCTCAAGCAATTGTTTTTGTATTGGTCAGATGTAAAGGATCTAGGATTTGAACGAGACCAAGTTCTTCAGAGACTCGAGCTTTTGAGCTTACAAGGTTGCCAGCAATTGTGCAATTTAGCTCCTCCCGCTGTATCACTGGCTTACTTAACATCTTTGGAACTGAATTATTGTCCGGGATTAAAGAATTTAATGGCATCCTCGACTGCCCAAAGCATGGTTCAACTCAAGACCATGAAGGTAATCTATTGTGGTGAAGTAGAGCAAATAGTAACAAATGAAGGAAGTGAAGAGATGAAAATTGTATTTGGCAAATTGATTACTATAGAACTTGCGTTGCTAAATAAACTCGCAAGTTTTTGCAGTTGCAATAACTGTAAGTTTGAATTCCCAACATTGGAAATATTGATCATAAGAGAATGCCCCAAGATGAAAACATTCACTGAGGGTTCCTCAACAACACCAAAGTTAGAAAGTATATTCGGTGTTGAAGGAGAGGAAAAATCGAAATGGCAGTGGGAAGGTGACTTGAATGCCACCGTACAAAAAGTTTTCAATGATAAGCTCACTTTCATCACGTACACTCAGGAGGGTCTGTTTCTTCGGGCTCATAATGAATTTATCATAAAAGAAGTATGGCTCGGCACTCACTCGGTGCAGCAGAACAGCTTTCGCCGTTTGAAAAGTTTGAATGCATGGGGATGGACTACTCTGGTGCATGTAATTCCATCTCATTTACTTTCTTGCTTTCAGAATTTGGAAATATTAACAGTAAAAAGTTGCAGTTCAGCACAGGTCATATTTAATATAAATGATGAGAACAGGAAAGCTTCGGGAATAAGCCGTTTGAAAAAGTTGGCTTTATATGATCTACCAAAACTAGAGCATGTATGGGATAAGGATCCTGAGGGAGTTATTGACCTTCAAATGCTAAACTATGAGTGTTGA 5160 0.3783 MPLEIRQWIRGGDEPEGEKIVAENFQRIIDTRKVSRGIGELVYRFGEMSFSREVAHPIFQIDNLPPSMDSLGPFGKVVERVIDSVWDHVVRQVTYILHYKQNVVELKHSVKDLRLEKERIDHQRDAAEKNLHNIEGKVTEWVQQVSEFESTVEEFENDEGHKRARSPNCYVFSYLRNRHRLGRQAKKMAVDVKKLKDESPKFDEVAYRQNVTSNDATLSNAGFVEFGSTKSTMEKVMRHLEDSSVRMIGLYGPGGVGKTTLIKEIARKAKDNKLFDRVARVEITANPNPQKIQEEIAYVLGLRLEGEGQNVRADCLRRRLKREKGNILLILDDLWDKLDLNKLGIPLDDDQDDDLSNNNKDYDKDRKVLKKEKILHDHKGCKLLLISRNRKVLHEEMDVKSIFCLKELDEKDALMLFQKVAKIPNEMSVSKQEIVKKYCAGLPMAIVTVARALRNKSESVWEATLEQLKKQELVGVQTSMDISVKMSYDHLENDEMKSILLVCAQMGHQALIMDLVKYCFGLGILEGVYSIREAREKIDRSIQMLKDSGLVLDGSSNIHFNMHDLVRDAALSIAHKDRNVFTLRNGKLDYWPELERFTSISVCDTDIIDGLPRVISCSQLQFFQINTIDPSLQIPDSFFGEMKNLRVLILTGFHLLNLPSSIEFLLQLRMLCLERCTLPDDLSKVGELKKIRILSFSGSQLKKLPPELRELDKLQLLDISDCSKLEIIPPNIISSLTRLEELYIRKSLIKMLVEVETNKVQDLFLSELKSLHELKVVDLSIPCASDLPNHLFFDKLKDYKIVIGDLEMFSVEDFRMPSKYESFRVLALQLKDNTNIHSLKGIKLLFKTVQILLLGKVDGVQNVVNELNTEGFPDLKHLFITNNNDIKYVTSTELSNCVNVFFPNLESLCLYNLRSLEMICYGPITVASFTKLKTIKVESCYHLKNLFLLYVDKFLTSPEMYEICECKSEMDKFLASLETIEVSECKSLKEILQIPEDYGKIEFLELSTLTLQSLPSFTSFYTKVGAQKTSVQRDKAPPLFGELVVIPNLESLNLSLKKLKSLIISECPNMKKILETEGNSGNKVCIFPKLEEFQLSKMNSLTDMWQTKVSVDSFSSLISVHIVECNKLDKIFPSHMEGWFESLENLKVSDCKSVEVIFEIKDSQEIDPSGGIDTNLQLILLEYLPKLKQLWSKDPEGILNFKTLRTVDVKHCDELRNLFPASVAKDFPKLERMSALFCGKMVGIVASEDASETNKDRLVFPELTCMKLYYLSNIKSFYEGRHPIKCPKLKELTVVGCHKLKIFSTETSKTTNEGHKFVLSAEKVFPKLEYLEIDMEEAQRWLSLNYQMHRLKEFHLSSVESVHLLYQFLYRMPNLENLYLTEDHREVLVPTANSAPQQILGTVIQLKQLFLYWSDVKDLGFERDQVLQRLELLSLQGCQQLCNLAPPAVSLAYLTSLELNYCPGLKNLMASSTAQSMVQLKTMKVIYCGEVEQIVTNEGSEEMKIVFGKLITIELALLNKLASFCSCNNCKFEFPTLEILIIRECPKMKTFTEGSSTTPKLESIFGVEGEEKSKWQWEGDLNATVQKVFNDKLTFITYTQEGLFLRAHNEFIIKEVWLGTHSVQQNSFRRLKSLNAWGWTTLVHVIPSHLLSCFQNLEILTVKSCSSAQVIFNINDENRKASGISRLKKLALYDLPKLEHVWDKDPEGVIDLQMLNYEC 1719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01884 1719 Pfam NB-ARC domain 230 350 IPR002182 GO:0043531
Spst4g01884 1719 Pfam NB-ARC domain 377 488 IPR002182 GO:0043531
Spst4g01884 1719 Gene3D - 407 492 IPR042197 -
Spst4g01884 1719 SUPERFAMILY L domain-like 972 1152 - -
Spst4g01884 1719 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1142 1304 - -
Spst4g01884 1719 Gene3D Ribonuclease Inhibitor 865 1171 IPR032675 -
Spst4g01884 1719 Gene3D Ribonuclease Inhibitor 1342 1717 IPR032675 -
Spst4g01884 1719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 503 IPR027417 -
Spst4g01884 1719 SUPERFAMILY RNI-like 1183 1380 - -
Spst4g01884 1719 Gene3D - 206 401 IPR027417 -
Spst4g01884 1719 Gene3D Ribonuclease Inhibitor 1174 1323 IPR032675 -
Spst4g01884 1719 SUPERFAMILY L domain-like 562 987 - -
Spst4g01884 1719 SMART AAA_5 244 413 IPR003593 GO:0016887
Spst4g01884 1719 PRINTS Disease resistance protein signature 247 262 - -
Spst4g01884 1719 PRINTS Disease resistance protein signature 439 453 - -
Spst4g01884 1719 PRINTS Disease resistance protein signature 321 335 - -
Spst4g01884 1719 PRINTS Disease resistance protein signature 709 725 - -
Spst4g01884 1719 Coils Coil 103 158 - -
Spst4g01884 1719 Gene3D Ribonuclease Inhibitor 570 840 IPR032675 -
Spst4g01884 1719 SUPERFAMILY RNI-like 1333 1666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01884 Spst-Chr4 59466512 59477079 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01884 - - vun:114166344 2123.21