Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01882 ATGCACCATTTACAACTAGTACATATTAAGGGTTGTGATGACCTTACAAGTGTGTTTCCGGCATTAGTAGCCAAAGATGTTGTGAAACTTGATGAACTAGTTGTGAAAGAGTGTGAGGGATTGATGACAACTGTTGCAGAGAATAATAATACACATGGAGAACTTACGTTGCCCTGTCCCTGTTATATTAAAGAATTGAATATAATACTTTTCCTATCTGTGGATTTCTTTTTCGTAGCCTACACCCAACTGGCACTGCCTGGCACTGGGTCAAAGTGGAGTGGATATGATTTGGCGTGGAGAATTTCAGAGAAACCTCTTACACAACTTGAAACTTCTTACTCTCTGCTGTTGGAATACGAAATTCTACAGCATGTGCCCAATATAGAGAAGCTTGTGGTGTGTGATGGTTCCTTCAAGGAGATCTTCTTTGGAAGTCCTAGTAATGTAGATTACAGTGGACTCTTAACACAGTTCAAAGTATTACACTTGGAGTCCCTTAGAGAGTTGGTTTCTGTTGGGTTAAACTTGGTAGCATCCAATCTGACTCATTTGAAAGTAAAAAGTTGCCATAAGCTGTCATATTTGTTCACATCCTCAACCGCCAAAAGTTTGGGTCAACTGAAAAGAATGGAGATAATAAGGTGTGAATCAATTGAAGAGATAGTGTCTAAGGAGGCGGAGGAATCAGAGGAGGATGAGATAACATTTCCGCAGCTCAGTTATTTGATTCTTCAAAGTTTATGGGATATGAGAAGGTTCTACGAAGGGAATTTAAGTTTTCCGGCATTGGAGGAATTGTCAGTAAGATATTGCAACAGGCTGATAACTTTATGTGCAGGTACAGTAAAAGCAGAGAAGTTGTCCCGTGTGAAATTTAAGGACGTAGATGACGATGGTGAGTTGTCAAAGGGTATTCCATTGGAAACTGATGTCAACTCTACTATGCGGAAGGAATTTACGAGAGAGGCTGCGTATTTGGAATGGCGTCTTGAATTCATAGATAGAGCAGACCTACAAGAGATATGGATTGTGGCACTGCAGATCCCTGACCTTCGCTTCACATACTTGAAGACCTTGATTGTGGACGGGTGCAGATTTTTATCCCATGTACTTCCCTTCAGTTTACTTCCTTTATTACCTGTATTGGAAACATTGGAAGTTCGAAACTGTGATGATGTGAAAACCATATTTGATGTCAAATGTATAACACAAGACACAGAAATGGCATCTATGGGACCAACCCTCCGACTTTCCCTCAAGTATTTGATTTTATCCAGGCTATCAAAGCTAGAGAATGTTTGGAATGAAGATCCTGATGGAATTCTAAGCATGCACCATCTACAACAAATACATATTGAAGGTTGTGATGGCCTTACAAGTGTGTTTCCGGCATCAGTAGCCAAAGATGTTGTGAAACTTGATGAACTAGTTGTGAATGACTGTAAGGGATTGATGACAATTGTAGCAGAGGATAATAATACAGATCCAAGCGGAACAAAAGGAGAGCTCACATTCTCCTGTCCCTGTGTGAGGTCATTGGAACTACGGGGTTTGCCCAACTTCAAGTGTTTTTACTACTGCTCACGGCAATGTGACATTTTTACGAATCTAGAATCATACACCGAGAATCAAATCCGTACTGAAAAGTGCCTGTCAGTGGGTGCAAATGGAGTGGATATGATTTTGCATCCAGAATTTCAGAGAATCCTCTTAGACAACTTAAAAGTTCTTACTCTCTGCTGTTGGATTGAGTCGGATGTATTTCCATATGAAATTCTACAACTGGTGCCCAATATAGAGAAGCTTGTGGTATGTGATGGTTCTTTCAAGGAGATATTCTGTGGAAGTGGTAATAAAGTGAATTATAGTAGACTTCTACTACATCTCAAAGTATTACACTTGGAGTCCCTTGGAGATCTGGTTTCCATTGGGTTAAACTTGAATGGAGATAATGAACTGTAA 1965 0.4 MHHLQLVHIKGCDDLTSVFPALVAKDVVKLDELVVKECEGLMTTVAENNNTHGELTLPCPCYIKELNIILFLSVDFFFVAYTQLALPGTGSKWSGYDLAWRISEKPLTQLETSYSLLLEYEILQHVPNIEKLVVCDGSFKEIFFGSPSNVDYSGLLTQFKVLHLESLRELVSVGLNLVASNLTHLKVKSCHKLSYLFTSSTAKSLGQLKRMEIIRCESIEEIVSKEAEESEEDEITFPQLSYLILQSLWDMRRFYEGNLSFPALEELSVRYCNRLITLCAGTVKAEKLSRVKFKDVDDDGELSKGIPLETDVNSTMRKEFTREAAYLEWRLEFIDRADLQEIWIVALQIPDLRFTYLKTLIVDGCRFLSHVLPFSLLPLLPVLETLEVRNCDDVKTIFDVKCITQDTEMASMGPTLRLSLKYLILSRLSKLENVWNEDPDGILSMHHLQQIHIEGCDGLTSVFPASVAKDVVKLDELVVNDCKGLMTIVAEDNNTDPSGTKGELTFSCPCVRSLELRGLPNFKCFYYCSRQCDIFTNLESYTENQIRTEKCLSVGANGVDMILHPEFQRILLDNLKVLTLCCWIESDVFPYEILQLVPNIEKLVVCDGSFKEIFCGSGNKVNYSRLLLHLKVLHLESLGDLVSIGLNLNGDNEL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01882 654 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 111 286 - -
Spst4g01882 654 SUPERFAMILY RNI-like 155 485 - -
Spst4g01882 654 Gene3D Ribonuclease Inhibitor 331 470 IPR032675 -
Spst4g01882 654 SUPERFAMILY L domain-like 346 644 - -
Spst4g01882 654 Gene3D Ribonuclease Inhibitor 99 299 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01882 Spst-Chr4 59391114 59402399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01882 - - vun:114166893 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01882 4 59391114 59402399 Spst4g01882 4 59391114 59402399 ECH