Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01871 ATGCCGCAAGGGGATTACATAGAGCGTCACCGAAGAGACTATGGCTACCGCCTCGATCACTTCGAGCGGAAGCGCAAGAAAGAGGCTCGGCAAGTTCACAAGCGCTCTGCAATGGCTCAGAAGGCCCTTGGTATCAAGGGAAAGATTATTGCCAAGAAAAATTATGCTGAAAAGGCGCAGATGAAGAAGACTTTGGCCATGCATGAGGAGTCAACATCTAGGCGCAAGGCCGATGATAATGTTCAGGATGGAGCCGTTCCTGCTTATCTACTGGACCGTGATAACACGACCAGAGCAAAGGTTCTCAGCAACACCATTAAGCAAAAGAGGAAGGAGAAGGCTGGGAAGTGGGATGTTCCTCTACCCAAGGTACGTCCTGTGGCTGAAGATGAAATGTTCAAAGTGGTCCGGACTGGTAAAAGAAAAACCAAGCAATGGAAGAGGATGGTTACTAAAGCTACATTTGTTGGGCCTGGTTTTACCAGGAAGCCTCCAAAGTATGAGCGATTCATTCGTCCAACAGGATTGCGGTTCACCAAAGCCCATGTCACTCATCCTGAACTTAAATGCACGTTTAATCTAGAAATAATTGGAGTAAAGAAAAATCCTAATGGCCCTATGTACACCTCCCTTGGTGTCATGACCAAGGGAACTATAATTGAGGTGAATGTTAGTGAACTTGGCCTTGTCACACCTGCGGGCAAAGTTGTGTGGGGAAAATATGCTCAGGTTACCAATAATCCAGAAAATGATGGTTGTATAAATGCGGTGTTACTTGTCTAA 783 0.461 MPQGDYIERHRRDYGYRLDHFERKRKKEARQVHKRSAMAQKALGIKGKIIAKKNYAEKAQMKKTLAMHEESTSRRKADDNVQDGAVPAYLLDRDNTTRAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01871 260 PANTHER RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG 1 260 IPR039411 -
Spst4g01871 260 Gene3D - 178 260 - -
Spst4g01871 260 Pfam Ribosomal protein S8e 35 259 IPR022309 -
Spst4g01871 260 CDD NSA2 4 260 IPR039411 -
Spst4g01871 260 FunFam NSA2, ribosome biogenesis homolog 177 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01871 Spst-Chr4 59290128 59293164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01871 K14842 - gmx:100801671 514.227