Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01835 ATGGCAACCGCAAGACGAAAATTCCCGTCGATCACAGAATGCAACGGAACGGCGTCACCGCGCGAGTCCGTCGCTGCCGACCTTGACGGAACGCTCCTCATCTCGCGCAGCTCCTTTCCGTACTTCATGCTCGTCGCCGTGGAAGCCGGCAGCCTCCTCCGCGGCTTCATCCTCCTCCTCGCGGTTCCGATCATAATCTTCTCTTACCTCTTCATATCAGAATCCCTCGGCATCCAGATCCTCATCTTCATCTCCTTCACTGGCCTTAAGATCCGCGACATCGAACTCGTCTCACGCGCCGTCCTCCCTAGGTTTTACGCTGCGGACGTGAGGAAGGAGAGCTTCGAGATGTTCGACCGGTGCAAGAGGAAGGTCGTGGTGACGGCGAATCCGACTGTGATGGTAGAGCCTTTCGTTAAGGACTTTCTCGGCGGAGACAAGGTGCTAGGAACGGAGATCGAGGTGAATCCGAAAACGAAGAAGGCCACCGGATTCGTAAAGAACCCTGGCGTGCTCGTCGGAAAGTGGAAGCGTCTTGCGGTTTTGAAAGAGTTCGGCGAGGAGTCGCCGGATGTTGGACTCGGAGATCGTAAGACGGACCACGATTTCATGTCCATTTGCAAGGAGGGTTACATGGTGCCTCCAAGCAAATCAGCAAAACCAGTCCCACAGGAGCGTCTGAAGAGCAGGCTCATCTTCCATGATGGTCGTTTCGTGCAGAAGCCAGACCCATTTAATGCTCTCCACACTTTCCTGTGGCTCCCCTTTGGTTTCATCCTCTCCATCATAAGGGTTTACTTCAACCTACCCCTCCCAGAACGCATAGTGCGCTATACCTATGAAATGTTGGGCATCAAGCTTGTGATCCGCGGCCACCGCCCTCCGCCTCCGTCTCCGGGCACCCCAGGCAACCTTTACGTTTGCAACCACCGCACCGCCCTCGACCCCATTGTCATCGCCATCGCCCTAGGCCGCAAGGTCTCCTGCGTCACTTATAGCGTCAGCAAGCTCTCCCGCTTCCTCTCACCGATCCCCACCGTCGCCCTCACTCGTGACCGTGCCGCCGACGCTGCCCGCATCACCGAGATCCTCCAGAAGGGTGATCTTGTCGTGTGTCCGGAGGGCACCACGTGCCGCGAGCCCTTTTTGCTTCGCTTCAGCGCACTCTTTGCAGAACTCAGCGACAGAATCGTGCCAGTGGCTGTTGACTGCAAGCAGAACATGTTCTTTGGGACTACTGTTCGTGGGGTCAAATTCTGGGATCCATATTTCTTCTTCATGAACCCAAGGCCAGTCTACGAGGTTACCTTCCTTGACCCCTTACCCGAGGAGATGTCCTGCAAGGCAGGGGGGAAGACTTCGATTGAGGTGGCGAATCACGTGCAGAAGGTGCTGGGGGATGTCTTGGGGTTCGAGTGCACCGGGTTGACTAGAAAGGATAAGTATATGTTGTTGGGTGGGAACGATGGGAAGGTGGAGTCTCTTTATGGTTCAAAGAAATGA 1503 0.5569 MATARRKFPSITECNGTASPRESVAADLDGTLLISRSSFPYFMLVAVEAGSLLRGFILLLAVPIIIFSYLFISESLGIQILIFISFTGLKIRDIELVSRAVLPRFYAADVRKESFEMFDRCKRKVVVTANPTVMVEPFVKDFLGGDKVLGTEIEVNPKTKKATGFVKNPGVLVGKWKRLAVLKEFGEESPDVGLGDRKTDHDFMSICKEGYMVPPSKSAKPVPQERLKSRLIFHDGRFVQKPDPFNALHTFLWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPTVALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFFGTTVRGVKFWDPYFFFMNPRPVYEVTFLDPLPEEMSCKAGGKTSIEVANHVQKVLGDVLGFECTGLTRKDKYMLLGGNDGKVESLYGSKK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01835 500 CDD LPLAT 280 441 - -
Spst4g01835 500 PANTHER ANCIENT UBIQUITOUS PROTEIN 22 494 - -
Spst4g01835 500 Gene3D - 99 228 IPR023214 -
Spst4g01835 500 SMART plsc_2 304 405 IPR002123 GO:0016746
Spst4g01835 500 Pfam Acyltransferase 303 393 IPR002123 GO:0016746
Spst4g01835 500 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 219 490 - -
Spst4g01835 500 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 106 225 - -
Spst4g01835 500 Pfam haloacid dehalogenase-like hydrolase 25 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01835 Spst-Chr4 58668334 58673012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01835 6 500 Acyl Lipid Metabolism Gene Families AT4G00400 79.596 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01835 K13508 - gmx:100794137 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01835 4 58668334 58673012 Spst4g01835 4 58668334 58673012 ECH