Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01823 ATGCTTTATTTCCCCTTCAGAAACAATTTTTCAGTTTACGCTTTCTGTAAACTGAATTTGTTGGATTTTCCCAACTCTCCCAATCTGGGTACACTTGAAAACAGTTTGTGGGCTCTGATTCAACACGGAGCATTGATGTCATTTATCTGTGGGCTTCCTATCCTTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCTTGGAAAAAATGTCTGTACACTGCAGGCTATGAGAGTGAAAATTGGGGGCTGGCTACTGCACAAGAATTTGAGCCTGTGCCTCGGATCTGTCGGCTAATCTTAGCTGTCTACGAAGATGATATTCGTAACCCTCAATGGGCTCCCCAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTGCGGAAGGACTACGGCCATAACCAAGGCTTTGTTACTCCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTGGCTGTTAGTGGACTCAATTTAGGGAAGGAAAGTGATTATGTTGTTTTGCTTGATAACAAGTTGGGACAGGCAGAATTTCATGGTGGTTATGTTCATAATGGGTTGTTGAAGGCAGCTGGATGGGTTTTTGACGCAGAATATGAGGTTCTCAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACCGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTAACAATGCTTGCAATTCATAATCGAGACAAATTGGGTATACCAAGAAGCAAGATAAGATGCTTTGCTATAGCTTCTCCTCGGTGCATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCCGTTGTACTTCAGGATGATTTTTTACCCCGGACAACCGCCGCTCTAGAAGATGTCTTCAAATCACTTTTATGTTGGCCCTGTTTATTGTGTATAATGTGCTTAAAGGATACCTGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTCTGTATGCACCTGGTCGGCTCTATCACATTGTGGAGAGAAAGCCCTTTAGGATAGGAAGATTTCCACCTGTTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGAGCATTTAGTTCTTTCTTGCAACGCAACATCTGATCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCTCTCAGTTTAATGCGAGATAAAGATGAGCATATGGAGATTCCAGCAAAGCAGAGGATGGAGAGGCATGAATCCATAGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGGGCAGTTGCTTTGGATATTCCACAAGCATACTCCCCTTCATCATACGGAACATTTCATGAAATTGATGTTGGAGAGGATTCTGGAAGATCAAGTCAAGGTTCCTCCTTGTCTCATAAGAAACGAACACAAAGTTGGAATGATTTTGTTGGACGTTTGTTTGATGTGGATGATTCAGGTCATATGGTGTTCAAAAAGACACCTCCATGA 1479 0.4327 MLYFPFRNNFSVYAFCKLNLLDFPNSPNLGTLENSLWALIQHGALMSFICGLPILECVYCLACARWAWKKCLYTAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPQGGYGINPDWVILRKDYGHNQGFVTPYMIYLDHDHAEIILAVSGLNLGKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAIHNRDKLGIPRSKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEDVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRIGRFPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALSLMRDKDEHMEIPAKQRMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHEIDVGEDSGRSSQGSSLSHKKRTQSWNDFVGRLFDVDDSGHMVFKKTPP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01823 492 CDD Lipase_3 89 285 - -
Spst4g01823 492 Pfam Lipase (class 3) 159 287 IPR002921 GO:0006629
Spst4g01823 492 Pfam Lipase 3 N-terminal region 55 119 IPR005592 GO:0016042
Spst4g01823 492 MobiDBLite consensus disorder prediction 445 464 - -
Spst4g01823 492 SUPERFAMILY alpha/beta-Hydrolases 89 295 IPR029058 -
Spst4g01823 492 Gene3D alpha/beta hydrolase 84 295 IPR029058 -
Spst4g01823 492 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 46 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01823 Spst-Chr4 58419741 58426706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01823 46 490 Miscellaneous Gene Families AT3G49050 60.888 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01823 - - gmx:100800227 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01823 4 58419741 58426706 Spst4g01823 4 58419741 58426706 ECH