Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01822 ATGCACTGCCGAAATCAAATCCTGCGCAAATTGTCACTCCTTATTGGATTTGGACATTGGAATGGAGAGAGAAGCAAAAGAACGGAACTCAGCACAGTTGAAGGTAGATCTGGTGTGGGTCACCACCCGATAAAGTCATGCACCCGCCGACCATCTTTATCCACCTCCGCGCAAATGGATAATGAGCAAGCATTTGAGTTTCTCGGTTGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTGTGAGGAAGATAGCTCAACTTGTGAATGTCAAACGCTATGTGAAGCGGCTAGAGCCGGGAGAGTATGTTGTTCGTGAGGGTGAACATGGTGATGGCGTGTACTTCATATTGGATGGAGAGGCTCAGGTTGTTGGATCTGTTAGTGCCAATGATGAAAATCGCCCAGAGTTCCAGTTGAAAAGATATGACTACTTTGGTTATGCTGACATGCTTAGTGCTTCCCCAAGAGCACGCAACACTACTGCAGCCAAAATCTATCTGGAGAGCAGAAAATGGTGTCGAGACATGCTCACCTGTGGAGAATATATTGCATTTGGAACACTTGGAGATATCTTCCGAGGAATTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGCTGATTGGACAGGGACTGGCCGCAGCGTCAAAATCTGTTGACTGTCTAAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTCCTGGGGATTTAAAAATTCCAATTACATATCAAGTTTATCGTATCCGTGATGGGAAGAGCTTTGCTACAAGGAAAGTAAATGGAATTCAAAAGGGAATTGTCATATTCACATTGCTGGCTTCATTTCAAAAAGAAGAATCAGGGATGGTCCACCAGGAAGTAACTATACCATCTGTCCCACCACCAGATAAGCTTCTGCCAATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAATCTACCGGAACAAAGTAGCTACATCTCAATTTATCCCCTGGCCCATAGAGATACGGTTATGTGAATATGAAATGTCAACAAATATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGCGTGGTTGCATTTGCTTCAGATCTAATATTTCTTCAAGTAAGTCTGAATCCGCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTGGATCACTCTATGTGGTTTCACCGATCTGTAAAAGCTGATGATTGGATGCTATTTACGATTTTTACTCCTAGTGCCCATAGCGCCCGCGTCTTTGTGAGCGGCCAAATGTTCAACCCGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCAAGCAAATTCACCAATTAAATCTAAGTTGTGA 1425 0.4421 MHCRNQILRKLSLLIGFGHWNGERSKRTELSTVEGRSGVGHHPIKSCTRRPSLSTSAQMDNEQAFEFLGCVPLLQRLPSSSVRKIAQLVNVKRYVKRLEPGEYVVREGEHGDGVYFILDGEAQVVGSVSANDENRPEFQLKRYDYFGYADMLSASPRARNTTAAKIYLESRKWCRDMLTCGEYIAFGTLGDIFRGITLPDAPRFGKVFGGQLIGQGLAAASKSVDCLKVVHSLHAYFILPGDLKIPITYQVYRIRDGKSFATRKVNGIQKGIVIFTLLASFQKEESGMVHQEVTIPSVPPPDKLLPMEELRERRLTDPRLPIIYRNKVATSQFIPWPIEIRLCEYEMSTNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVKADDWMLFTIFTPSAHSARVFVSGQMFNPKGELLVSLVQEGLARKINQANSPIKSKL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01822 474 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 293 462 IPR029069 -
Spst4g01822 474 Pfam Cyclic nucleotide-binding domain 96 163 IPR000595 -
Spst4g01822 474 FunFam Acyl-CoA thioesterase II 186 464 - -
Spst4g01822 474 SUPERFAMILY cAMP-binding domain-like 66 163 IPR018490 -
Spst4g01822 474 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 191 287 IPR029069 -
Spst4g01822 474 CDD Thioesterase_II_repeat2 191 283 - -
Spst4g01822 474 CDD CAP_ED 73 160 IPR000595 -
Spst4g01822 474 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 104 120 IPR018488 -
Spst4g01822 474 CDD Thioesterase_II_repeat1 358 459 - -
Spst4g01822 474 ProSiteProfiles cAMP/cGMP binding motif profile. 73 163 IPR000595 -
Spst4g01822 474 SMART cnmp_10 73 192 IPR000595 -
Spst4g01822 474 MobiDBLite consensus disorder prediction 28 55 - -
Spst4g01822 474 PANTHER ACYL-COA THIOESTERASE 191 462 IPR003703 GO:0006637|GO:0047617
Spst4g01822 474 Gene3D - 188 463 IPR042171 -
Spst4g01822 474 Pfam Thioesterase-like superfamily 206 459 - -
Spst4g01822 474 Gene3D Jelly Rolls 55 179 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01822 Spst-Chr4 58400421 58408903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01822 59 474 Acyl Lipid Metabolism Gene Families AT1G01710 58.851 1.18e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01822 K01068 - gmx:100797680 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01822 4 58400421 58408903 Spst4g01822 4 58400421 58408903 ECH