Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01813 ATGTTACCTCGTACCTCCCTATGGTGGTTTGGGACGAACCTATTATATCCTGGGAGAACATCATATCTGGTCGATGAATCCTCAAGAACTTTCTTCGAGAAGAATGGAGATGGGGGTGGCCCTTCAGAATGTGACAACCAGTACCATTCTGATGACACACCAATAGTTGCACTCTCCACTGGATGGTTCAACCACAAGAGCAGGTGCCACAAGAAGATCACCATACACGGCAATGGCAAGAGTGTGGAGGCCATGGTAGTTGATGAGTGTGACTCCACCATGGGGTGTGATGCAGACCATGATTATCAACCTCCTTGTACCAACAACATTGTTGATGCATCAAAGGCTGTGTGGGAAGCTTTGGGTGTGCCTCATGACCAGTGGGGTGGATTACAAATCACTTGGTCTGATGCTTAA 417 0.4772 MLPRTSLWWFGTNLLYPGRTSYLVDESSRTFFEKNGDGGGPSECDNQYHSDDTPIVALSTGWFNHKSRCHKKITIHGNGKSVEAMVVDECDSTMGCDADHDYQPPCTNNIVDASKAVWEALGVPHDQWGGLQITWSDA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01813 138 SUPERFAMILY Barwin-like endoglucanases 35 136 IPR036908 -
Spst4g01813 138 CDD DPBB_kiwellin-like 32 137 - -
Spst4g01813 138 Gene3D - 25 137 IPR036908 -
Spst4g01813 138 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 32 137 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01813 Spst-Chr4 58323903 58324435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01813 - - gmx:100792850 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01813 4 58323903 58324435 Spst4g01813 4 58323903 58324435 ECH