Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01811 ATGTCCGAAGAGGATCGAATAAGCCAGTTACCAGACGATATTCTATGCAAAATCCTTTCATTACTTACAACCAAGGAAGCCATAGCTACGTCCTTCTTGTCCACCAGGTGGAAATTCGTATGGACCATGGTTCCATCTATTGACATTCAGTGCACCAAAAAAATCGTGAAAAAGCAGTCCTCCTTGTCCACCAGATGGAGATTTCTATTGAAAATGGTTTCATTTCTGAACATTCTGTGCAGCAAACCAACCATGGAATATCACGAGAAGATCGATGAATTCTTGGATCGACGCAGAGCAGAAAAGATCACTAGGTTTTCTCTCCTATGTACTTGCAATTGTTGTTTCGTAAATAACGTGCAAGAATGGGTCTATGCAGTGGTAGCAAGAAAAGTTGAAAAACTGGATATCAACTTGCGGATATACAATGGAAAGGTGCTCTCCTTCTCCAATTTGTTCACTTGCACCACAATTGACACCTTGAGTATCCAAGGCCCCTTTGATATCTCTATTCCTTCTTCTGCCCATCTCCCCAATGTCAAGAGCATAACACTACGTGTCAACACATGCTTACCCTACTCCAATGTTAGAACCCTAATTTCTGGATCTCCAGCTCTTGAATTTTTCTACCTCTTTAATATGAAGCAGAAAATGTATAATTATTATTTCCAGGAGTTGAAAATTGTGCGTAACTCAAGGGGTATGCGATTGCACCGTAACAACAGTATGGCTTATAACCTTTTTATACACAGTGATGATCGTGACTCAGATTTTATCTTAGATTTGGAGGAGATAAATCAATGGCCTAAAGTTCTGGACTCCAAGATTCATCTGACAATATACTTGACCGTGGAAGAGGAGTCTTTTGCTGAGATTCTTGTCGCAATACGTAACGTTAAATATCTGTCTCTGAGATGTTTTAAGCAAGACATGCTACCTTCCATTCATGTTTTTCCACCAAAGTTTTGGAATTTAGTTGAGCTTCAACTTTTTATTAAAAGGGATGACCCCTTCTCCATGGAATTTCCTAGCGTCTGTCCTAGCCTTCAAGTTCTTGAATATAATTTCATGGATGGTTACTTTGGTGCCGGTGAGAGATATCGATATCATATTAGGGACGGAGTAAGGAAGCGTGACCTTTCAATTGTTCCTGTTTGTCCTACAATTAGCAAACTTGGAAACTTCCTTAATGGTTGGGAGAGCTGA 1206 0.3988 MSEEDRISQLPDDILCKILSLLTTKEAIATSFLSTRWKFVWTMVPSIDIQCTKKIVKKQSSLSTRWRFLLKMVSFLNILCSKPTMEYHEKIDEFLDRRRAEKITRFSLLCTCNCCFVNNVQEWVYAVVARKVEKLDINLRIYNGKVLSFSNLFTCTTIDTLSIQGPFDISIPSSAHLPNVKSITLRVNTCLPYSNVRTLISGSPALEFFYLFNMKQKMYNYYFQELKIVRNSRGMRLHRNNSMAYNLFIHSDDRDSDFILDLEEINQWPKVLDSKIHLTIYLTVEEESFAEILVAIRNVKYLSLRCFKQDMLPSIHVFPPKFWNLVELQLFIKRDDPFSMEFPSVCPSLQVLEYNFMDGYFGAGERYRYHIRDGVRKRDLSIVPVCPTISKLGNFLNGWES 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01811 401 Pfam F-box domain 7 42 IPR001810 GO:0005515
Spst4g01811 401 Gene3D - 3 47 - -
Spst4g01811 401 ProSiteProfiles F-box domain profile. 4 55 IPR001810 GO:0005515
Spst4g01811 401 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 5 355 - -
Spst4g01811 401 SUPERFAMILY F-box domain 4 53 IPR036047 GO:0005515
Spst4g01811 401 CDD F-box_AtFBL13-like 7 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01811 Spst-Chr4 58245272 58246477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01811 5 214 EF-hand Containing Proteins AT5G41840 28.947 3.05e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01811 - - gmx:102659597 289.656