Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01805 ATGACGAAATGGATTTTCGTCTCCATCATCATCTTGGTTGTTTCTGTTACAAGCTCTTTCATCCTCGAAATTGATCTTTTCAGAATAGCAAGCACTAGTCTTACTATATTCAATTCACAACAACCTAAATTCCCACTTTATTGCTCTGATGGGAAGTTAACAACTTGTTCATCAAACTATCCAACAAACATTGAGTTTGAAGATGATTCATCATCTACATCATGTCCAGATTACTTTAAATGGATTCATGAAGATCTAAAACCATGGGAGAGTACAGGAATCACGAGGGAAATGATTGAAAGAGGCAAAAACATTTCACATATTAGGCTTGTAATTGTAAATGGAAAAGCTTATATAGAAAAGCATGGCAAGGTGTTTCAAACAAGAGATTTGTTCACAATATGGGGAATTTTGCAACTCCTAAGGTTGTATCCCGGAAAAATACCAGATTTGGAGCTACTGTTTCAATGTGGAGACAAGACTGTGGTAAACAAAAATGATTTCCAAGAACCACAGATTTCACCTCCACCTGTGTTCCATTACTGTGGAGATGAAAATTCGTATGACATTGTCTTCCCTGATTGGACCTTCTGGGGTTGGGCTGAGCTTAACATAAGACCATGGGAAGCAACATTGCATAATATACAAGAAGGCAACAAAATAGTCAAATGGAAGGATAGGATACCCTATGCTTTTTGGAAGGGAAACCCAAAAGTGTCCTATGTTAGGGGAGAACTTGGCAAGTGCAACGCCACAGAAAAACATGACTGGAATGCAAGAATATATGGCATACAATGGCAGCATGAGAAAGCAAGTAATTTTGAGAACTCAAAACTGGAAAATCAATGTACCTTTAGATATAAGATCTATACAGAAGGAGCTACATGGTCTGTAAGTGAAAAGTACATAATAGCATGTGACTCAATGACCATGTTCATAGAGCCTAAGTATTATGACTTCTTTACAAGAAACATGTTACCTTTGCGACACTATTGGCCTATCAGCATCAGAAACATGTGCGAAGAGATCAAGTATGCAGTGGATTGGGGAAATGCTCACCTTGACAGTGCACAAGCGATTGGCATGCAAGGAACCAACTACATCGTAGAGAATTTAAAGATGAAGTTTGTGTATGATTACATGTTTCATCTATTCAATGAGTATGCAAAACTCTTGAAATTCAAACCAACTATACCTACCGGAGCTGTTGAAACCTGCTCTGAAAATATGGTTTGTCCCCTGCGTGGTTTAAAGAAACGTCTTTTGGTTGAGTCCATGGTGACTTCACCAAGTGAGACACCTCCATGTACAATGCCTCCTCCTTATACACCCGAAGCTTTGCAAGAGTTTCTTCAAGAAAAGAAAAATCTATTCAAACAAGTGAAGACAAGGAAGATAAACATAAAACAATAA 1413 0.38 MTKWIFVSIIILVVSVTSSFILEIDLFRIASTSLTIFNSQQPKFPLYCSDGKLTTCSSNYPTNIEFEDDSSSTSCPDYFKWIHEDLKPWESTGITREMIERGKNISHIRLVIVNGKAYIEKHGKVFQTRDLFTIWGILQLLRLYPGKIPDLELLFQCGDKTVVNKNDFQEPQISPPPVFHYCGDENSYDIVFPDWTFWGWAELNIRPWEATLHNIQEGNKIVKWKDRIPYAFWKGNPKVSYVRGELGKCNATEKHDWNARIYGIQWQHEKASNFENSKLENQCTFRYKIYTEGATWSVSEKYIIACDSMTMFIEPKYYDFFTRNMLPLRHYWPISIRNMCEEIKYAVDWGNAHLDSAQAIGMQGTNYIVENLKMKFVYDYMFHLFNEYAKLLKFKPTIPTGAVETCSENMVCPLRGLKKRLLVESMVTSPSETPPCTMPPPYTPEALQEFLQEKKNLFKQVKTRKINIKQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01805 470 Pfam Glycosyl transferase family 90 71 463 IPR006598 -
Spst4g01805 470 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 52 463 - -
Spst4g01805 470 SMART cap10 147 395 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01805 Spst-Chr4 58189744 58191982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01805 - - gmx:100813234 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01805 4 58189744 58191982 Spst4g01805 4 58189744 58191982 ECH