Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01800 ATGGCGTCTTCAGTTTCATCTTCAGAGGAAAGTAATTGGGGTCGAAGGGTATCCGAAAAGGTTCTTTCTCTCTACGCTTCTCTTCCCAAAAAGGGCAAACCTCAAGGCCGTGAAGTCACCGTTATCGCTGCTTTCCTTCTCTCTTCTCCTTCCAATGACTTGAAGATTGTTGCTATGGGAACGGGAACAAAGTGCATTGGGCGTTCTCTCTTGCGAACTTGTGGTGATGTTGTTCATGATTCGCATGCTGAAGTCATTGCTCGAAGAGCTTTGATGAGGTTCTTGTATACACAGATTCAACATCTTACTGAAACTAGTAGTAAGCATGCGCCTACCAATGGAGGCAAACGGTTCAAACTTGATGATGGTAACTTGCCATTTGAGTTGGATACAGGGTGTCTTAAAAAAGGAAAATATACTTTGAGAAAGGATTGGAAATTACATATGTACATATCACAGTTACCATGTGGCGATGCTTCACTGAGTTCGCTTGTCTCTCCTTTGGAAAGTGTTCCTTTAGGAGAAAGAGATTCAGCTTCACCTTTGGATAACGGTTTACAACAACATGGGATGGTCCAGAGGAAGCCAGGTCGTGGTGATACAACCCTGTCAGTTAGTTGCTCTGACAAGATAGCTCGTTGGAATGTAGTTGGTGTTCAAGGAGCATTACTTTCCTACTTTCTTCAACCTGTATATCTTTCTTCAATCACTGTTGGTCTTCCCCTTAACAGTCCTGAGAATTTTCATTTAGAGGATAACTTGAAAAGAGCTTTATATGAACGTATCCTGCCCATATCGAATGAACTGACATCCCCGTTTATAGTGAACCAGCCAATATTTCACGCTGCACCAGTACCACCAAAGGACTTTCAGCAATCTGAGAGTGCTGCCAACACTTTAACATGCGGATATTCTATATGTTGGAATGAATGTGGCTTGCATGAAGTCATCCTGGGAACCACCGGAAGAAAGCAAGGCACCTCCGCAAAAGGGGCACTCTATCCATCCACACAGTCATCTTTATGCAAAAAGAGGGTGTTGGAGGGTTTCTTGTCACTGCTGAGACAGGAAAATTTGACGAGGTCTCTGGCCAATGGGATTACCTACCGAGAACTTAAGGATGGAGCTGAAGAATATAATTTGGCTTCCAAAATTTTCAAAGGGAATCAACCTTTTAACAAGTGGCTCTTGAAGACCTTAGGTTGTGAGGCATTCCCCATTTCAGAAAATTAA 1233 0.4298 MASSVSSSEESNWGRRVSEKVLSLYASLPKKGKPQGREVTVIAAFLLSSPSNDLKIVAMGTGTKCIGRSLLRTCGDVVHDSHAEVIARRALMRFLYTQIQHLTETSSKHAPTNGGKRFKLDDGNLPFELDTGCLKKGKYTLRKDWKLHMYISQLPCGDASLSSLVSPLESVPLGERDSASPLDNGLQQHGMVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSITVGLPLNSPENFHLEDNLKRALYERILPISNELTSPFIVNQPIFHAAPVPPKDFQQSESAANTLTCGYSICWNECGLHEVILGTTGRKQGTSAKGALYPSTQSSLCKKRVLEGFLSLLRQENLTRSLANGITYRELKDGAEEYNLASKIFKGNQPFNKWLLKTLGCEAFPISEN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01800 410 MobiDBLite consensus disorder prediction 176 201 - -
Spst4g01800 410 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 8 405 - -
Spst4g01800 410 SMART adara_8 12 406 IPR002466 GO:0003723|GO:0004000|GO:0006396
Spst4g01800 410 Pfam Adenosine-deaminase (editase) domain 58 398 IPR002466 GO:0003723|GO:0004000|GO:0006396
Spst4g01800 410 ProSiteProfiles Adenosine to inosine editase domain profile. 58 387 IPR002466 GO:0003723|GO:0004000|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01800 Spst-Chr4 58123223 58126512 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01800 K15440 - gmx:100789591 710.294