Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01793 ATGGCAGAAGCAACAAAGAGCAACCAATATGGAAAACTAGATATATTGGTAAACGATGCTGGAATTCCTGGAGCACATTGGGATGGTGAGGCTTTGGCTGCTGCATTTTCTGTTGAAAATGGTGGCAATGTTGATTGGAGTAAAGTATCAACTGAAAGCTATGAACTATCTGAAGCAGCTCTTAAAACAAACTATTATGGAACCAAGGAATTGACCAAAGCACTTATTCCCCTTCTCCACCTTTCACCCTCTCCAAAAATTGTCAATGTTTCCTCATCCACAGGAAGGCTTCAGAACATACCGAATGGATGGCCTAAAGAAGTACTGAGTGATGTTGAAAAGCTTACAGAAGAGAAGATTGATGACATTTTGAATGAATTTCTAAAGGACTTTAAAGAGGGTACCCTAGAAACCAAAGGCTGGCCTCTTGCTGTGCCTGCATATAGTGTCTCAAAAGCTGCTCTGAATGCCTACACAAGGATTCTGGCCAAGAAGTACCCCTCATTCTGCATCAATGCTGTTTGTCCTGATTATATCAGAACTGATATTACCAAAAATACTGGTTCTCGAACACCTGATGAAGGTGCTGAAGCTGCTAGGAATAGCATAGATGATGAAGGGAATAAAGAAAAAAGTGGGAAAATAAAGCAGATACTGGAGGTTGAACAGAAACAGGGTGGTGAAATGGAGGGAAAGAGATTTTTTGTGGCGGTTCACGTCGGCGCCGGTTACCACTCACCGACGAACGACAGAGCTCTCAGGACTGCCATGAACCGCGCTTGTCTCGCCGCCGCTTCCGTTCTCTCCAACGGTTCGGGAACGCGCCTAGACGCCGTCGTAGCCGCCATTCAAGTGTTGGAGGATGATCCCTGCACAAACGCTGGCAGAGGCTCCAATTTGACTGAGGACGGTAGCGTGGAATGCGACGCGAGTGTTATGGACGGCAAAATTGGAGCTTTTGGGGCTGTTGGGGCAGTGCCAGGTGTCCGAAATGCTATACAAATTGCCGCTTTATTGGCCAAAGAGCAAATGATGGGATCTCCGTTGTTGGGTCGAATTCCTCCAATCTTTTTGGTTGGCGAAGGGGCTCGCAAATGGGCCAAGGCTAAAGACATTGCTTTGCCAACAAGTATCGAGGAGGCCAATGAGTGGTTGGTCACAGAAAGGGCTAAAGCACAATGGATAAAATACAAATCCATGATTGAAACTGCTAGATCTAAGACAAACAACACTCCTGAGGGCAATTCTTCTGTTTCTCAAAGTACCACGATAGCAGATAGTGCTTTGGAAGATAGCGTAATGGACACTGTTGGGGTTATTTGTATAGATAGTGAGGGGCATGTTGCATCTGGAGCCTCCAGTGGTGGTATTGCTCTAAAGGTTAGTGGACGTGTTGGGTTGGCAGCAATGTATGGTTCAGGGTGTTGGGCATCATCAAAAGGGCCCTTTGGGGCTCCATTCATGGCTGGTTGTTGCGTATCTGGGGCAGGAGAGCACCTAATGAAAGGATTTGCTGCTAGGGAATGCTGTGTTTCATTGTCACTCTCACAGTCTGGTGCTGCTTCTGCTTGCACAAAAATTTTACGCTCTGTTGTTGAGGATGGCAGGCAATATGGTACTGATAGCAGTGCAGGGATCTTGGTTGTGCAGTCAGATGCATCTTTAACAGATCAAGGAAAATCATCAAGGCTGAAGGCTGTAGAGTTTGCCGCTGCATACACTTCCTTGTCTTTTGGAGTAGGATATTTTGGAAGCTCTATGGAGCGTCCCAAGGTTTCCATTCTTAGGAGTACAAAACAACAAAGCCGGACAGCAATAGATCAATTTGGAGCACGGATAGATCTTTCAAATGGATAG 1857 0.4593 MAEATKSNQYGKLDILVNDAGIPGAHWDGEALAAAFSVENGGNVDWSKVSTESYELSEAALKTNYYGTKELTKALIPLLHLSPSPKIVNVSSSTGRLQNIPNGWPKEVLSDVEKLTEEKIDDILNEFLKDFKEGTLETKGWPLAVPAYSVSKAALNAYTRILAKKYPSFCINAVCPDYIRTDITKNTGSRTPDEGAEAARNSIDDEGNKEKSGKIKQILEVEQKQGGEMEGKRFFVAVHVGAGYHSPTNDRALRTAMNRACLAAASVLSNGSGTRLDAVVAAIQVLEDDPCTNAGRGSNLTEDGSVECDASVMDGKIGAFGAVGAVPGVRNAIQIAALLAKEQMMGSPLLGRIPPIFLVGEGARKWAKAKDIALPTSIEEANEWLVTERAKAQWIKYKSMIETARSKTNNTPEGNSSVSQSTTIADSALEDSVMDTVGVICIDSEGHVASGASSGGIALKVSGRVGLAAMYGSGCWASSKGPFGAPFMAGCCVSGAGEHLMKGFAARECCVSLSLSQSGAASACTKILRSVVEDGRQYGTDSSAGILVVQSDASLTDQGKSSRLKAVEFAAAYTSLSFGVGYFGSSMERPKVSILRSTKQQSRTAIDQFGARIDLSNG 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01793 618 PANTHER L-ASPARAGINASE 234 592 IPR000246 GO:0016787
Spst4g01793 618 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 204 IPR036291 -
Spst4g01793 618 MobiDBLite consensus disorder prediction 197 211 - -
Spst4g01793 618 FunFam Putative threonine aspartase isoform A 436 603 - -
Spst4g01793 618 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 234 588 IPR029055 -
Spst4g01793 618 Gene3D (Glycosyl)asparaginase 436 605 - -
Spst4g01793 618 Pfam Asparaginase 236 535 IPR000246 GO:0016787
Spst4g01793 618 PRINTS Glucose/ribitol dehydrogenase family signature 11 22 IPR002347 -
Spst4g01793 618 PRINTS Glucose/ribitol dehydrogenase family signature 167 184 IPR002347 -
Spst4g01793 618 PRINTS Glucose/ribitol dehydrogenase family signature 79 95 IPR002347 -
Spst4g01793 618 PRINTS Glucose/ribitol dehydrogenase family signature 148 167 IPR002347 -
Spst4g01793 618 CDD Taspase1_like 234 616 IPR037464 GO:0004298
Spst4g01793 618 MobiDBLite consensus disorder prediction 184 211 - -
Spst4g01793 618 Gene3D - 1 223 - -
Spst4g01793 618 Pfam short chain dehydrogenase 8 98 IPR002347 -
Spst4g01793 618 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 IPR002347 -
Spst4g01793 618 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 93 IPR002347 -
Spst4g01793 618 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 11 22 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01793 Spst-Chr4 58070652 58077721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01793 227 615 Miscellaneous Gene Families AT4G00590 58.291 4.81e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01793 K08657 - gmx:100808057 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01793 4 58070652 58077721 Spst4g01793 4 58070652 58077721 ECH