Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01788 ATGATTCCTGAGGGTCTTGATAAAAGGCCCTTCAAGGACATCGTTGGTATGATTGTGGAGCACAAGTTCAACTATGTGTGTCTTACCTATGCAATTTACATGTGGACACGCTATGTCCACGACAATGTCAATGTCACACTTACCTCTTTGGATGTGCTAGGTGTGGTCCAAGGCATTGCCAAGAGCAACCCTTCTGTGTTATCCATGACACATGTTCAGGTCTTTGATTCTGTTGTTCGTAAACTTGAGATTTAG 255 0.4314 MIPEGLDKRPFKDIVGMIVEHKFNYVCLTYAIYMWTRYVHDNVNVTLTSLDVLGVVQGIAKSNPSVLSMTHVQVFDSVVRKLEI 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01788 84 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01788 Spst-Chr4 58031781 58032035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01788 2 83 Glycoside Hydrolase AT3G26130 31.765 6.65e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01788 - K01179 lang:109359704 103.99