Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01783 ATGGGAGAAGCAACAGAAAGGTATGCAGTTGTGACTGGTGCAAATAAAGGAATTGGATTAGAGATAGTTAAGCAGTTAGCTTCAGCTGGGATCAAGGTGGTGCTCACAGCAAGAAATGAGGAGAGGGGTCTCCATGCAATGGAAACTATCAAAGCCTCAGGTTTATCTCACCTTGTAATGTTTCATCAGGTGGATGTGGCTGATGCAACAAGTGTAGCTTCTCTGGCTGATTTTATCAAATCTGAATGTGGGAAACTTGATATTCTGGTTAACAATGCAGGGATTGGTGGAGGAGCAATTAAAGACACTGATTTGTTCACCTCAGTCCTCTTCAATCGTGGGACCATTTTAAATACCAACGATAAGTATGGTCAAAGTAAACCTTATAGAGGATTGGACAATCCAAATCTCAACAATTAG 420 0.4119 MGEATERYAVVTGANKGIGLEIVKQLASAGIKVVLTARNEERGLHAMETIKASGLSHLVMFHQVDVADATSVASLADFIKSECGKLDILVNNAGIGGGAIKDTDLFTSVLFNRGTILNTNDKYGQSKPYRGLDNPNLNN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01783 139 Pfam short chain dehydrogenase 8 101 IPR002347 -
Spst4g01783 139 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 102 - -
Spst4g01783 139 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 99 IPR036291 -
Spst4g01783 139 Gene3D - 3 131 - -
Spst4g01783 139 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Spst4g01783 139 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01783 Spst-Chr4 57940056 57941185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01783 3 105 Acyl Lipid Metabolism Gene Families AT1G63380 35.455 4.65e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01783 K15095 - gmx:102663482 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01783 4 57940056 57941185 Spst4g01783 4 57940056 57941185 ECH