Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01772 ATGGCAACCAATTCAAGAACTCTCGAGTTCACGCTTCTGTCAGCGGAAGGTCTCCACATCAGGGGGAAACCGGCAGACAAGAACGTCTTCGCGGTGGTTCGCGCGGACTCCATAGCCAGCCACACGACGGCGACAGCGACAGCGACGGGGAGCAACGGGTCGCTGTCCTGGAAGGAGACGTTCTCGGTGGAAGTGGGGGCGCACGCGAGGTGCATGACGATTGAAGTGAAGTGCAGGACGGGAGCGGGAGAGAGAGACGTTGGCGTGGCAAGAATCGCGCTTTCGGATTTTCTGGGAGGGTCGGTCCCCGAACACAAGTTGCAGTTTTTGTGCTACAGGTTGAGGGACTGGGATGGGAGAGAAAATGGGATCGTTAATTTCTCCGTCAGAGTGGTGGCGCCGCCGCCTCACGATGGCGGCGCTGAGGATGATTGTGCGCCGTCGTTGGGTGGAGTTGTTACCGGCATTCCCGTTTGGAGGAACGAGTCATCGACAAGTAGCATGAGCAATGTTTGA 516 0.5795 MATNSRTLEFTLLSAEGLHIRGKPADKNVFAVVRADSIASHTTATATATGSNGSLSWKETFSVEVGAHARCMTIEVKCRTGAGERDVGVARIALSDFLGGSVPEHKLQFLCYRLRDWDGRENGIVNFSVRVVAPPPHDGGAEDDCAPSLGGVVTGIPVWRNESSTSSMSNV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01772 171 PANTHER INGRESSION PROTEIN FIC1 6 133 - -
Spst4g01772 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 133 IPR035892 -
Spst4g01772 171 Pfam C2 domain 7 106 IPR000008 -
Spst4g01772 171 CDD C2_SRC2_like 7 127 IPR044750 GO:0006952
Spst4g01772 171 Gene3D C2 domain 5 131 IPR035892 -
Spst4g01772 171 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Spst4g01772 171 SMART C2_3c 7 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01772 Spst-Chr4 57787888 57788403 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01772 - - pvu:PHAVU_010G093500g 204.142