Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst4g01771 | ATGGAGGTAAAACAACAGAAACGCACCTTGGAGATCACGGTGATATCGGGAGAAAACATAAGTATGGATCGAAAATCAGTGGCGGAGAACGCTTATGTTGTTGTTCGTGCTGAGTCGTTGAATTGTTGCACGACCAAAATGGTGAATGCAGATGAAGGAGTGCATGCATGGAAGGAGAAAATGGTGTTGGAGGTTCCTTCCCATGCAAGGTCGGTTACGTTCGATGTGCAATGCAAGAAGTACAGAGGAGTTCGTTCTATTGGGGTGGCAAGGATTGCACTTTCGGATTTACTTGGTGCCAAAAACGATGATGTTGTGTCCGAAAGTGTGCCTGGAATGTTTTGTTACTGGTTGAGGAATTGGGAGGGTCGACGAAACGGGGTTATTCATTTCTCCGTGAAGGTGGTGGATAATTTGTTTTCAGAAACCATACAAAAGAAAGATACAGGAATGATGTATTCTGGAGGAATTGAGAATGAGGTTATGGGGTTTGTTGTGAACCCTAAGAAATCCACTCGTCTTGTTATTGGTATTCCAGTTAATCGGTGCCAAACCGTTGCTTGA | 564 | 0.4397 | MEVKQQKRTLEITVISGENISMDRKSVAENAYVVVRAESLNCCTTKMVNADEGVHAWKEKMVLEVPSHARSVTFDVQCKKYRGVRSIGVARIALSDLLGAKNDDVVSESVPGMFCYWLRNWEGRRNGVIHFSVKVVDNLFSETIQKKDTGMMYSGGIENEVMGFVVNPKKSTRLVIGIPVNRCQTVA | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst4g01771 | 187 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 140 | - | - | |
| Spst4g01771 | 187 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 136 | IPR035892 | - | |
| Spst4g01771 | 187 | Gene3D | C2 domain | 7 | 136 | IPR035892 | - | |
| Spst4g01771 | 187 | Pfam | C2 domain | 9 | 98 | IPR000008 | - | |
| Spst4g01771 | 187 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Spst4g01771 | 187 | SMART | C2_3c | 9 | 106 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst4g01771 | Spst-Chr4 | 57776336 | 57776899 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst4g01771 | - | - | gmx:100810274 | 236.884 |